ProteinBERT: a universal deep-learning model of protein sequence and function N Brandes, D Ofer, Y Peleg, N Rappoport, M Linial Bioinformatics, 2022 | 440 | 2022 |
An expanded evaluation of protein function prediction methods shows an improvement in accuracy Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ... Genome biology 17, 1-19, 2016 | 419 | 2016 |
Single-cell RNA-seq reveals cell type–specific molecular and genetic associations to lupus RK Perez, MG Gordon, M Subramaniam, MC Kim, GC Hartoularos, S Targ, ... Science 376 (6589), eabf1970, 2022 | 224 | 2022 |
Significantly Improved COVID-19 Outcomes in Countries with Higher BCG Vaccination Coverage: A Multivariable Analysis M Klinger Danielle, Blass Ido, Rappoport Nadav, Linial Vaccines 8 (3), 2020 | 98 | 2020 |
ProtoNet 6.0: organizing 10 million protein sequences in a compact hierarchical family tree N Rappoport, S Karsenty, A Stern, N Linial, M Linial Nucleic Acids Research 40 (D1), D313-D320, 2012 | 55 | 2012 |
Bladder cancer immunotherapy by BCG is associated with a significantly reduced risk of Alzheimer’s disease and Parkinson’s disease D Klinger, BL Hill, N Barda, E Halperin, ON Gofrit, CL Greenblatt, ... Vaccines 9 (5), 491, 2021 | 53 | 2021 |
A genome-wide association study identifies only two ancestry specific variants associated with spontaneous preterm birth N Rappoport, J Toung, D Hadley, RJ Wong, K Fujioka, J Reuter, ... Scientific reports 8 (1), 226, 2018 | 47 | 2018 |
Viral proteins acquired from a host converge to simplified domain architectures N Rappoport, M Linial PLoS computational biology 8 (2), e1002364, 2012 | 42 | 2012 |
PatientExploreR: an extensible application for dynamic visualization of patient clinical history from electronic health records in the OMOP common data model BS Glicksberg, B Oskotsky, PM Thangaraj, N Giangreco, MA Badgeley, ... Bioinformatics 35 (21), 4515-4518, 2019 | 40 | 2019 |
Comparing ethnicity-specific reference intervals for clinical laboratory tests from EHR data N Rappoport, H Paik, B Oskotsky, R Tor, E Ziv, N Zaitlen, AJ Butte The journal of applied laboratory medicine 3 (3), 366-377, 2018 | 33 | 2018 |
Divergent patterns of mitochondrial and nuclear ancestry are associated with the risk for preterm birth N Crawford, JW Oehlert, GM Shaw, DK Stevenson, N Rappaport, M Sirota, ... The Journal of pediatrics 194, 40-46. e4, 2018 | 22 | 2018 |
A model and test for coordinated polygenic epistasis in complex traits B Sheppard, N Rappoport, PR Loh, SJ Sanders, N Zaitlen, A Dahl Proceedings of the National Academy of Sciences 118 (15), e1922305118, 2021 | 17 | 2021 |
Optimizing operation room utilization—a prediction model B Abbou, O Tal, G Frenkel, R Rubin, N Rappoport Big Data and Cognitive Computing 6 (3), 76, 2022 | 15 | 2022 |
Overlooked short toxin-like proteins: a shortcut to drug design M Linial, N Rappoport, D Ofer Toxins 9 (11), 350, 2017 | 13 | 2017 |
Revisiting the risk factors for endometriosis: a machine learning approach I Blass, T Sahar, A Shraibman, D Ofer, N Rappoport, M Linial Journal of Personalized Medicine 12 (7), 1114, 2022 | 12 | 2022 |
NeuroPID: a classifier of neuropeptide precursors S Karsenty, N Rappoport, D Ofer, A Zair, M Linial Nucleic acids research 42 (W1), W182-W186, 2014 | 12 | 2014 |
ProtoNet: charting the expanding universe of protein sequences N Rappoport, N Linial, M Linial Nature Biotechnology 31 (4), 290-292, 2013 | 12 | 2013 |
Tracing diagnosis trajectories over millions of patients reveal an unexpected risk in schizophrenia H Paik, MJ Kan, N Rappoport, D Hadley, M Sirota, B Chen, U Manber, ... Scientific data 6 (1), 201, 2019 | 11 | 2019 |
Reproducible variability: assessing investigator discordance across 9 research teams attempting to reproduce the same observational study A Ostropolets, Y Albogami, M Conover, JM Banda, WA Baumgartner Jr, ... Journal of the American Medical Informatics Association 30 (5), 859-868, 2023 | 10 | 2023 |
PANDORA: analysis of protein and peptide sets through the hierarchical integration of annotations N Rappoport, M Fromer, R Schweiger, M Linial Nucleic acids research 38 (suppl_2), W84-W89, 2010 | 10 | 2010 |