Community-wide assessment of protein-interface modeling suggests improvements to design methodology SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ... Journal of Molecular Biology, 2011 | 159 | 2011 |
DNABINDPROT: fluctuation-based predictor of DNA-binding residues within a network of interacting residues P Ozbek, S Soner, B Erman, T Haliloglu Nucleic acids research 38 (suppl_2), W417-W423, 2010 | 66 | 2010 |
Integer programming based heterogeneous cpu–gpu cluster schedulers for slurm resource manager S Soner, C Özturan Journal of computer and system sciences 81 (1), 38-56, 2015 | 39 | 2015 |
Hot spots in a network of functional sites P Ozbek, S Soner, T Haliloglu PLoS One 8 (9), e74320, 2013 | 36 | 2013 |
DynaFace: discrimination between obligatory and non-obligatory protein-protein interactions based on the complex’s dynamics S Soner, P Ozbek, JI Garzon, N Ben-Tal, T Haliloglu PLoS Computational Biology 11 (10), e1004461, 2015 | 10 | 2015 |
Generating multibillion element unstructured meshes on distributed memory parallel machines S Soner, C Ozturan Scientific Programming 2015 (1), 437480, 2015 | 9 | 2015 |
Experiences with parallel multi-threaded network maximum flow algorithm S Soner, C Ozturan Technical report, PRACE, 2013 | 9 | 2013 |
Parallel mesh generation, migration and partitioning for the elmer application Y Yılmaz, C Özturan, O Tosun, AH Özer, S Soner Tech. Rep., PREMA-Partnership for Advanced Computing in Europe, 2010 | 9 | 2010 |
An auction based slurm scheduler for heterogeneous supercomputers and its comparative performance study S Soner, C Ozturan Technical report, PRACE, 2013. http://www. prace-project. eu/IMG/pdf …, 2013 | 6 | 2013 |
Topologically aware job scheduling for SLURM S Soner, C Ozturan Tech. Rep., 2014.[Online]. Available: http://www. prace-ri. eu/IMG/pdf/WP180 …, 2014 | 5 | 2014 |
Extending SLURM with Support for GPU Ranges S Soner, C Ozturan, I Karac PRACE, 2013 | 4 | 2013 |
A new auction‐based scheduler for heterogeneous systems with moldable generic resources support S Soner, C Ozturan Concurrency and Computation: Practice and Experience 28 (8), 2341-2352, 2016 | 3 | 2016 |
DynaFace: Discrimination between Obligatory and Non-obligatory Protein-Protein Interactions Based on the Complex’s Dynamics T Haliloglu, N Ben-Tal, J Garzon, P Ozbek, S Soner | 2 | 2015 |
Job scheduling for heterogeneous supercomputers S Soner Thesis (Ph. D.)-Bogazici University. Institute for Graduate Studies in …, 2016 | | 2016 |
Generating Massive Unstructured Meshes for OpenFOAM S Soner, C Ozturan PRACE, 2014 | | 2014 |
Poster: co-allocation based scheduling for parallel systems S Soner, C Özturan, O Tosun Proceedings of the 2011 companion on High Performance Computing Networking …, 2011 | | 2011 |
Study of protein-protein interfaces using Gaussian network model S Soner Fen Bilimleri Enstitüsü, 2009 | | 2009 |
Co-Allocation Based Scheduling For Parallel Systems S Soner, C Özturan, O Tosun | | |