| Small-world communication of residues and significance for protein dynamics AR Atilgan, P Akan, C Baysal Biophysical journal 86 (1), 85-91, 2004 | 384 | 2004 |
| Perturbation-response scanning reveals ligand entry-exit mechanisms of ferric binding protein C Atilgan, AR Atilgan PLoS computational biology 5 (10), e1000544, 2009 | 232 | 2009 |
| Manipulation of conformational change in proteins by single-residue perturbations C Atilgan, ZN Gerek, SB Ozkan, AR Atilgan Biophysical journal 99 (3), 933-943, 2010 | 157 | 2010 |
| MD-TASK: a software suite for analyzing molecular dynamics trajectories DK Brown, DL Penkler, O Sheik Amamuddy, C Ross, AR Atilgan, ... Bioinformatics 33 (17), 2768-2771, 2017 | 153 | 2017 |
| Noncovalent intramolecular interactions in the monomers and oligomers of the acceptor and donor type of low band gap conducting polymers AS Özen, C Atilgan, G Sonmez The Journal of Physical Chemistry C 111 (44), 16362-16371, 2007 | 80 | 2007 |
| Screened nonbonded interactions in native proteins manipulate optimal paths for robust residue communication AR Atilgan, D Turgut, C Atilgan Biophysical journal 92 (9), 3052-3062, 2007 | 80 | 2007 |
| Allosteric modulation of human Hsp90α conformational dynamics DL Penkler, C Atilgan, O Tastan Bishop Journal of Chemical Information and Modeling 58 (2), 383-404, 2018 | 73 | 2018 |
| Consistent picture of the reversible thermal unfolding of hen egg-white lysozyme from experiment and molecular dynamics F Meersman, C Atilgan, AJ Miles, R Bader, W Shang, A Matagne, ... Biophysical journal 99 (7), 2255-2263, 2010 | 66 | 2010 |
| High-order epistasis in catalytic power of dihydrofolate reductase gives rise to a rugged fitness landscape in the presence of trimethoprim selection YT Tamer, IK Gaszek, H Abdizadeh, TA Batur, KA Reynolds, AR Atilgan, ... Molecular biology and evolution 36 (7), 1533-1550, 2019 | 65 | 2019 |
| Perturbation–response scanning reveals key residues for allosteric control in Hsp70 D Penkler, O Sensoy, C Atilgan, O Tastan Bishop Journal of Chemical Information and Modeling 57 (6), 1359-1374, 2017 | 65 | 2017 |
| Network-based models as tools hinting at nonevident protein functionality C Atilgan, OB Okan, AR Atilgan Annual review of biophysics 41 (1), 205-225, 2012 | 56 | 2012 |
| A trimethoprim derivative impedes antibiotic resistance evolution MS Manna, YT Tamer, I Gaszek, N Poulides, A Ahmed, X Wang, ... Nature communications 12 (1), 2949, 2021 | 52 | 2021 |
| Mapping and reverse-mapping of the morphologies for a molecular understanding of the self-assembly of fluorinated block copolymers G Kacar, C Atilgan, AS Ozen The Journal of Physical Chemistry C 114 (1), 370-382, 2010 | 52 | 2010 |
| Designing molecular dynamics simulations to shift populations of the conformational states of calmodulin AO Aykut, AR Atilgan, C Atilgan PLoS computational biology 9 (12), e1003366, 2013 | 48 | 2013 |
| Relaxation kinetics and the glassiness of proteins: the case of bovine pancreatic trypsin inhibitor C Baysal, AR Atilgan Biophysical Journal 83 (2), 699-705, 2002 | 48 | 2002 |
| Elucidating the structural mechanisms for biological activity of the chemokine family C Baysal, AR Atilgan Proteins: Structure, Function, and Bioinformatics 43 (2), 150-160, 2001 | 46 | 2001 |
| MODE-TASK: large-scale protein motion tools C Ross, B Nizami, M Glenister, O Sheik Amamuddy, AR Atilgan, C Atilgan, ... Bioinformatics 34 (21), 3759-3763, 2018 | 43 | 2018 |
| Complete mapping of the morphologies of some linear and graft fluorinated co-oligomers in an aprotic solvent by dissipative particle dynamics A Sema Özen, U Sen, C Atilgan The Journal of chemical physics 124 (6), 2006 | 41 | 2006 |
| Coordination topology and stability for the native and binding conformers of chymotrypsin inhibitor 2 C Baysal, AR Atilgan Proteins: Structure, Function, and Bioinformatics 45 (1), 62-70, 2001 | 41 | 2001 |
| Free energy based populations of interconverting microstates of a cyclic peptide lead to the experimental NMR data C Baysal, H Meirovitch Biopolymers: Original Research on Biomolecules 50 (3), 329-344, 1999 | 40 | 1999 |
Ali Rana AtilganProfessor at Sabanci University and Adjunct Professor at Bogazici University, Istanbul, Turkey在 sabanciuniv.edu 的电子邮件经过验证
