| An atlas of healthy and injured cell states and niches in the human kidney BB Lake, R Menon, S Winfree, Q Hu, R Melo Ferreira, K Kalhor, ... Nature 619 (7970), 585-594, 2023 | 161 | 2023 |
| Integration of spatial and single-cell transcriptomics localizes epithelial cell–immune cross-talk in kidney injury RM Ferreira, AR Sabo, S Winfree, KS Collins, D Janosevic, ... JCI insight 6 (12), 2021 | 89 | 2021 |
| The orchestrated cellular and molecular responses of the kidney to endotoxin define a precise sepsis timeline D Janosevic, J Myslinski, TW McCarthy, A Zollman, F Syed, X Xuei, H Gao, ... Elife 10, 2021 | 82 | 2021 |
| Molecular characterization of the human kidney interstitium in health and disease D Barwinska, TM El-Achkar, R Melo Ferreira, F Syed, YH Cheng, ... Science Advances 7 (7), eabd3359, 2021 | 34 | 2021 |
| Preferential duplication of intermodular hub genes: an evolutionary signature in eukaryotes genome networks RM Ferreira, JL Rybarczyk-Filho, RJS Dalmolin, MAA Castro, JCF Moreira, ... PloS one 8 (2), e56579, 2013 | 16 | 2013 |
| Pharmacogenomics of hypertension in CKD: the CKD-PGX study MT Eadon, J Maddatu, SM Moe, AD Sinha, RM Ferreira, BW Miller, ... Kidney360 3 (2), 307, 2022 | 12 | 2022 |
| Deconvolution tactics and normalization in renal spatial transcriptomics R Melo Ferreira, BJ Freije, MT Eadon Frontiers in Physiology 12, 812947, 2022 | 11 | 2022 |
| Alterations in protein translation and carboxylic acid catabolic processes in diabetic kidney disease KS Collins, MT Eadon, YH Cheng, D Barwinska, R Melo Ferreira, ... Cells 11 (7), 1166, 2022 | 6 | 2022 |
| Analytic solutions for links and triangles distributions in finite Barabási–Albert networks RM Ferreira, RMC de Almeida, LG Brunnet Physica A: Statistical Mechanics and its Applications 466, 105-110, 2017 | 6 | 2017 |
| A spatially anchored transcriptomic atlas of the human kidney papilla identifies significant immune injury in patients with stone disease VH Canela, WS Bowen, RM Ferreira, F Syed, JE Lingeman, AR Sabo, ... Nature Communications 14 (1), 4140, 2023 | 5 | 2023 |
| Spatial transcriptomics and the kidney R Melo Ferreira, DL Gisch, MT Eadon Current Opinion in Nephrology and Hypertension 31 (3), 244-250, 2022 | 5 | 2022 |
| Master equation for the degree distribution of a Duplication and Divergence network V Sudbrack, LG Brunnet, RMC de Almeida, RM Ferreira, D Gamermann Physica A: Statistical Mechanics and its Applications 509, 588-598, 2018 | 5 | 2018 |
| The chromatin landscape of healthy and injured cell types in the human kidney DL Gisch, M Brennan, BB Lake, J Basta, MS Keller, R Melo Ferreira, ... Nature Communications 15 (1), 433, 2024 | 4 | 2024 |
| Clinical, histopathologic and molecular features of idiopathic and diabetic nodular mesangial sclerosis in humans MT Eadon, S Lampe, MM Baig, KS Collins, R Melo Ferreira, H Mang, ... Nephrology Dialysis Transplantation 37 (1), 72-84, 2022 | 3 | 2022 |
| A spatially anchored transcriptomic atlas of the human kidney papilla identifies significant immune injury and matrix remodeling in patients with stone disease VH Canela, WS Bowen, RM Ferreira, JE Lingeman, AR Sabo, ... bioRxiv, 2022.06. 22.497218, 2022 | 2 | 2022 |
| Integration of spatial transcriptomic and single cell sequencing identifies expression patterns underlying immune and epithelial cell cross-talk in acute kidney injury RM Ferreira, AR Sabo, S Winfree, KS Collins, D Janosevic, C Gulbronson, ... bioRxiv, 2021.01. 19.427258, 2021 | 2 | 2021 |
| Interindividual variability in lymphocyte stimulation and transcriptomic response predicts mycophenolic acid sensitivity in healthy volunteers KS Collins, YH Cheng, RM Ferreira, H Gao, MD Dollins, D Janosevic, ... Clinical and translational science 13 (6), 1137-1149, 2020 | 2 | 2020 |
| Defining the molecular correlate of arteriolar hyalinosis in kidney disease progression by integration of single cell transcriptomic analysis and pathology scoring R Menon, EA Otto, L Barisoni, R Melo Ferreira, CP Limonte, B Godfrey, ... medRxiv, 2023.06. 14.23291150, 2023 | 1 | 2023 |
| The orchestrated cellular and molecular responses of the kidney to endotoxin define the sepsis timeline D Janosevic, J Myslinski, T McCarthy, A Zollman, F Syed, X Xuei, H Gao, ... bioRxiv, 2020.05. 27.118620, 2020 | 1 | 2020 |
| Proteomic analysis of murine kidney proximal tubule sub-segment derived cell lines reveals preferences in mitochondrial pathway activity RM Ferreira, R de Almeida, C Culp, F Witzmann, M Wang, R Kher, ... Journal of Proteomics 289, 104998, 2023 | | 2023 |
