Genomic characterization of a novel SARS-CoV-2

RA Khailany, M Safdar, M Ozaslan - Gene reports, 2020 - Elsevier
… 94 genomes, some of the genomes were not used for the analysis due to unusually high
variants with gaps. NC_045512 genome sequence was used for reference and the genomic

Full-genome sequences of the first two SARS-CoV-2 viruses from India

PD Yadav, VA Potdar, ML Choudhary… - Indian Journal of …, 2020 - journals.lww.com
coronavirus 2 (SARS-CoV-2) has globally affected 195 countries. In India, suspected cases
were screened for SARS-CoV-… study was to characterize SARS-CoV-2 sequences from three …

The genetic sequence, origin, and diagnosis of SARS-CoV-2

H Wang, X Li, T Li, S Zhang, L Wang, X Wu… - European Journal of …, 2020 - Springer
… full-length genome sequences obtained from infected patients showed that SARS-CoV-2 is
… -like bat CoVs than the SARS-CoVs based on of the whole-genome sequence [14]. Analysis …

Genomic analysis and comparative multiple sequences of SARS-CoV2

TJ Chang, DM Yang, ML Wang, KH Liang… - Journal of the …, 2020 - journals.lww.com
… The genomic sequence of RaTG13 cited the 96% similarity with the Wuhan coronavirus.
Although … Thus, in this report, we compared SARS-CoV2 sequences from different countries to …

Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities

M Chiara, AM D'Erchia, C Gissi… - Briefings in …, 2021 - academic.oup.com
… If the aim of the study is to obtain an accurate representation of the genomic sequence of
a novel strain of SARS-CoV-2, de-novo assembly should always be preferred to reference-…

[PDF][PDF] Genomic sequencing of SARS-CoV-2: a guide to implementation for maximum impact on public health, 8 January 2021

World Health Organization - 2021 - apps.who.int
… This section reviews how SARS-CoV-2 genome sequencing has been used at different
phases of the COVID-19 pandemic and suggests possible future applications. It also provides …

Genomic characteristics and clinical effect of the emergent SARS-CoV-2 B. 1.1. 7 lineage in London, UK: a whole-genome sequencing and hospital-based cohort …

D Frampton, T Rampling, A Cross, H Bailey… - The Lancet infectious …, 2021 - thelancet.com
… The lower observed diversity within the SARS-CoV-2 sequenced genomes included in this
study is consistent with B.1.1.7 transmission occurring more readily during early infection. A …

Genome sequencing of sewage detects regionally prevalent SARS-CoV-2 variants

A Crits-Christoph, RS Kantor, MR Olm, ON Whitney… - MBio, 2021 - Am Soc Microbiol
… Viral genome sequencing has guided our understanding of the spread and extent of …
SARS-CoV-2 during the COVID-19 pandemic. SARS-CoV-2 viral genomes are usually sequenced

First detection and genome sequencing of SARSCoV‐2 in an infected cat in France

C Sailleau, M Dumarest… - Transboundary and …, 2020 - Wiley Online Library
SARS-CoV-2 in both serum samples taken 10 days apart. Genome sequence analysis revealed
that the cat SARS-CoV-2 … like most of the French human SARS-CoV-2. This study reports …

[HTML][HTML] Genomic sequencing effort for SARS-CoV-2 by country during the pandemic

Y Furuse - International Journal of Infectious Diseases, 2021 - Elsevier
SARS-CoV-2 genomic sequences per reported COVID-19 case varied widely among countries.
Iceland sequenced … each country’s genomic sequencing efforts of SARS-CoV-2 from the …