[HTML][HTML] Identification of COVID-19-associated DNA methylation variations by integrating methylation array and scRNA-Seq data at cell-type resolution

G Wang, Z Xiong, F Yang, X Zheng, W Zong, R Li… - Genes, 2022 - mdpi.com
methylation array data at the bulk level, scRNA-seq data, and the regulatory relationship
between methylation … the single-cell DNA methylation level to reveal specific cell types of DNA …

[HTML][HTML] Blood DNA methylation and COVID-19 outcomes

J Balnis, A Madrid, KJ Hogan, LA Drake, HC Chieng… - Clinical …, 2021 - Springer
… We identified 36 genes that were both differentially methylated and differentially expressed
… Lastly, our analysis is based on a high-capacity chip array which despite contributing …

Genome-wide DNA methylation profiling of peripheral blood reveals an epigenetic signature associated with severe COVID-19

MJ Corley, APS Pang, K Dody, PA Mudd… - Journal of leukocyte …, 2021 - academic.oup.com
array 13 in peripheral blood mononuclear cells of 9 individuals with severe … the methylation
signal associated with severe COVID-19. We used the eFORGE 2.0 tool 26 to identify a cell-…

[HTML][HTML] Host methylation predicts SARS-CoV-2 infection and clinical outcome

IR Konigsberg, B Barnes, M Campbell… - Communications …, 2021 - nature.com
methylation patterns could differentiate patients with SARS-CoV-2 infection who go on to
develop severe disease. In this study, we identified a strong COVID-… methylation beadchip array

Mild SARS-CoV-2 infection modifies DNA methylation of peripheral blood mononuclear cells from COVID-19 convalescents

J Huoman, S Sayyab, E Apostolou, L Karlsson… - medRxiv, 2021 - medrxiv.org
… The observed methylome-wide differences prompted us to identify differentially methylated
of the Illumina Infinium MethylationEPIC 850K arrays described in this paper. Additionally, we …

[HTML][HTML] Epigenome-wide DNA methylation profiling of healthy COVID-19 recoverees reveals a unique signature in circulating immune cells

J Huoman, S Sayyab, E Apostolou, L Karlsson… - 2021 - europepmc.org
… The observed methylome-wide differences prompted us to identify differentially methylated
of the Illumina Infinium MethylationEPIC 850K arrays described in this paper. Additionally, we …

[HTML][HTML] DNA methylation predicts the outcome of COVID-19 patients with acute respiratory distress syndrome

M Bradic, S Taleb, B Thomas, O Chidiac… - Journal of Translational …, 2022 - Springer
… status of study participants, we used Infinium MethylationEPIC 850 Array (~ 850,000 CpG …
as for CpGs, in which we identified 4788 hypermethylated in COVID-19 patients containing …

An epigenome‐wide DNA methylation study of patients with COVID‐19

S Zhou, J Zhang, J Xu, F Zhang, P Li… - Annals of human …, 2021 - Wiley Online Library
… , the identified key genes and related pathways in the current study can be used to study the
molecular mechanisms of COVID-19 … methylated sites are referred to simply as “Total array” …

[HTML][HTML] Whole-Genome Methylation Sequencing Reveals that COVID-19–induced Epigenetic Dysregulation Remains 1 Year after Hospital Discharge

J Balnis, A Madrid, KJ Hogan, LA Drake… - American Journal of …, 2023 - atsjournals.org
… Using DNA methylation arrays (which capture ∼3% of the … identify regions and transcripts
that parallel disabling COVID-… methylation data from individuals hospitalized with COVID-19 (…

[HTML][HTML] Whole blood DNA methylation analysis reveals respiratory environmental traits involved in COVID-19 severity following SARS-CoV-2 infection

G Barturen, E Carnero-Montoro… - Nature …, 2022 - nature.com
… We identified 530 CpGs differentially methylated in at least one regression model, and …
2B), due to the EPIC array probe selection. This probes’ preferential location facilitates the …