Systematic identification of cell-fate regulatory programs using a single-cell atlas of mouse development

L Fei, H Chen, L Ma, WE, R Wang, X Fang, Z Zhou… - Nature Genetics, 2022 - nature.com
… To reveal cellular heterogeneity in mouse tissues during the development, we performed t-…
gene expression patterns with regard to mouse development (Supplementary Table 9). For …

Systematic mapping of chromatin state landscapes during mouse development

DU Gorkin, I Barozzi, Y Zhang, AY Lee, B Li, Y Zhao… - BioRxiv, 2017 - biorxiv.org
systematically profile histone modifications in a diverse panel of mouse tissues at 8
developmental … their activity across developmental time and space. Through integrative analysis …

[HTML][HTML] An internet-accessible database of mouse developmental anatomy based on a systematic nomenclature

JBL Bard, MH Kaufman, C Dubreuil, RM Brune… - … of development, 1998 - Elsevier
mouse developmental anatomy (DMDA) that currently holds a hierarchy of the names and
synonyms of the tissues in the first 22 Theiler stages of development (… mutant mouse anatomy, …

Systematic identification and integrative analysis of novel genes expressed specifically or predominantly in mouse epididymis

J Oh, J Lee, JM Woo, E Choi, I Park, C Han, N Baek… - BMC genomics, 2006 - Springer
… Our study is unique in the aspect of systematic identification of novel epididymal genes and
should be a firm basis for future investigation into molecular mechanisms underlying sperm …

Systematic identification and characterization of long intergenic non-coding RNAs in fetal porcine skeletal muscle development

W Zhao, Y Mu, L Ma, C Wang, Z Tang, S Yang… - Scientific reports, 2015 - nature.com
… We developed a pipeline to identify 570 multi-exon lincRNAs by integrating a set of … with
developmental functions. We further experimentally analyzed the features of a conserved mouse

Systematic approaches to mouse mutagenesis

SDM Brown, R Balling - Current opinion in genetics & development, 2001 - Elsevier
… Moreover, in delivering a comprehensive mutant map of the mouse it … mouse genome
sequences; but the prospects are formidable. The development of the mutant map of the mouse

Systematic Identification of cis-Regulatory Sequences Active in Mouse and Human Embryonic Stem Cells

M Grskovic, C Chaivorapol, A Gaspar-Maia, H Li… - PLoS …, 2007 - journals.plos.org
… To identify putative transcription factors that can bind to the motifs, we systematically searched
databases of known transcription factors. We did not find a match for most of the motifs, eg…

Systematic reconstruction of cellular trajectories across mouse embryogenesis

C Qiu, J Cao, BK Martin, T Li, IC Welsh, S Srivatsan… - Nature …, 2022 - nature.com
… sheer complexity of mouse development. Here, we set out to systematically reconstruct the
… Motivated by this, we sought to systematically identify TFs that are candidates for specifying …

[PDF][PDF] A systematic approach to identify candidate transcription factors that control cell identity

AC D'Alessio, ZP Fan, KJ Wert, P Baranov, MA Cohen… - Stem cell reports, 2015 - cell.com
Systematic identification of these core TFs for a wide variety of cell types is currently lacking
… the transcriptional control of cell identity in development, disease, and cell-based therapy. …

A systematic screen for genes expressed in definitive endoderm by Serial Analysis of Gene Expression (SAGE)

J Hou, AM Charters, SC Lee, Y Zhao, MK Wu… - BMC developmental …, 2007 - Springer
… in mouse than in chicken, frog or fish. Thus ensuring high efficiency in the screening for
tissue-specific genes during mouse development is an important consideration. To identify novel …