Making next-generation sequencing work for you: approaches and practical considerations for marker development and phylogenetics

GT Godden, IE Jordon-Thaden, S Chamala… - Plant Ecology & …, 2012 - Taylor & Francis
Recent reviews are setting the stage for the use of next-generation sequencing technologies
in phylogenetic applications. However, the processes for developing new markers for …

Next–generation sequencing and systematics: What can a billion base pairs of DNA sequence data do for you?

N Harrison, CA Kidner - Taxon, 2011 - Wiley Online Library
The increasing speed and decreasing cost of generating DNA sequence data has
transformed experimental approaches in many fields of biology. In this review we describe …

The potential of genomics in plant systematics

DE Soltis, MA Gitzendanner, G Stull, M Chester… - Taxon, 2013 - Wiley Online Library
Next‐generation sequencing (NGS) has revolutionized molecular systematics as well as
population and conservation genetics. It is now possible to obtain enormous amounts of …

[PDF][PDF] Utility of transcriptome sequencing for phylogenetic inference and character evolution

J Wen, AN Egan, RB Dikow… - … -generation sequencing in …, 2015 - repository.si.edu
Transcriptome sequencing or RNA-Seq is one of the most efficient and cost-effective
methods currently available for gene discovery in non-model organisms. Recent studies …

[图书][B] Molecular Plant Taxonomy

P Besse - 2021 - Springer
Plant taxonomy is an ancient discipline facing new challenges with the availability of a vast
array of modern molecular technologies. The literature reviews and protocols that appear as …

Applications of next‐generation sequencing in plant biology

AN Egan, J Schlueter… - American journal of …, 2012 - Wiley Online Library
The last several years have seen revolutionary advances in DNA sequencing technologies
with the advent of next‐generation sequencing (NGS) techniques. NGS methods now allow …

Targeted sequence capture as a powerful tool for evolutionary analysis1

CE Grover, A Salmon, JF Wendel - American journal of botany, 2012 - Wiley Online Library
Next‐generation sequencing technologies (NGS) have revolutionized biological research by
significantly increasing data generation while simultaneously decreasing the time to data …

Plant DNA sequencing for phylogenetic analyses: from plants to sequences

SS Neves, LL Forrest - Network Biology: Methods and Applications, 2011 - Springer
DNA sequences are important sources of data for phylogenetic analysis. Nowadays, DNA
sequencing is a routine technique in molecular biology laboratories. However, there are …

Choosing an approach and an appropriate gene for phylogenetic analysis

DE Soltis, PS Soltis - Molecular systematics of plants II: DNA sequencing, 1998 - Springer
A diverse array of molecular approaches is now available to the plant systematist for use in
phylogenetic inference, including restriction site analysis, comparative sequencing, analysis …

Contributions of PCR-based methods to plant systematics and evolutionary biology

AD Wolfe, A Liston - Molecular systematics of plants II: DNA sequencing, 1998 - Springer
In less than a decade, the polymerase chain reaction (PCR) has evolved into the common
denominator of molecular biology for nucleic acid research. The most important impact of …