An epigenome atlas of neural progenitors within the embryonic mouse forebrain

CT Rhodes, JJ Thompson, A Mitra, D Asokumar… - Nature …, 2022 - nature.com
A comprehensive characterization of epigenomic organization in the embryonic mouse
forebrain will enhance our understanding of neurodevelopment and provide insight into …

Single cell epigenomic atlas of the developing human brain and organoids

RS Ziffra, CN Kim, A Wilfert, TN Turner, M Haeussler… - BioRxiv, 2019 - biorxiv.org
Dynamic changes in chromatin accessibility coincide with important aspects of neuronal
differentiation, such as fate specification and arealization and confer cell type-specific …

[HTML][HTML] Single-cell epigenomics reveals mechanisms of human cortical development

RS Ziffra, CN Kim, JM Ross, A Wilfert, TN Turner… - Nature, 2021 - nature.com
During mammalian development, differences in chromatin state coincide with cellular
differentiation and reflect changes in the gene regulatory landscape. In the developing brain …

Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation

S Preissl, R Fang, H Huang, Y Zhao, R Raviram… - Nature …, 2018 - nature.com
Abstract Analysis of chromatin accessibility can reveal transcriptional regulatory sequences,
but heterogeneity of primary tissues poses a significant challenge in mapping the precise …

Chromatin accessibility dynamics in a model of human forebrain development

AE Trevino, N Sinnott-Armstrong, J Andersen, SJ Yoon… - Science, 2020 - science.org
INTRODUCTION The cerebral cortex is responsible for higher-order functions in the nervous
system and has undergone substantial expansion in size in primates. The development of …

Comparative single-cell multiome identifies evolutionary changes in neural progenitor cells during primate brain development

Y Liu, X Luo, Y Sun, K Chen, T Hu, B You, J Xu… - Developmental Cell, 2024 - cell.com
Understanding the cellular and genetic mechanisms driving human-specific features of
cortical development remains a challenge. We generated a cell-type resolved atlas of …

Dynamics of chromatin accessibility during human first-trimester neurodevelopment

CCA Mannens, L Hu, P Lönnerberg, M Schipper… - bioRxiv, 2023 - biorxiv.org
The human brain is capable of highly complex functions that develops through a tightly
organized cascade of patterning events, expressed transcription factors and changes in …

[HTML][HTML] Epigenetic regulation during human cortical development: Seq-ing answers from the brain to the organoid

EMA Lewis, K Kaushik, LA Sandoval, I Antony… - Neurochemistry …, 2021 - Elsevier
Epigenetic regulation plays an important role in controlling gene expression during complex
processes, such as development of the human brain. Mutations in genes encoding …

Multimodal profiling of the transcriptional regulatory landscape of the developing mouse cortex identifies Neurog2 as a key epigenome remodeler

F Noack, S Vangelisti, G Raffl, M Carido… - Nature …, 2022 - nature.com
How multiple epigenetic layers and transcription factors (TFs) interact to facilitate brain
development is largely unknown. Here, to systematically map the regulatory landscape of …

Molecular and cellular dynamics of the developing human neocortex at single-cell resolution

L Wang, C Wang, JA Moriano, S Chen, G Zuo… - bioRxiv, 2024 - biorxiv.org
The development of the human neocortex is a highly dynamic process and involves complex
cellular trajectories controlled by cell-type-specific gene regulation. Here, we collected …