Next-generation sequencing in aging research: emerging applications, problems, pitfalls and possible solutions

JP De Magalhães, CE Finch, G Janssens - Ageing research reviews, 2010 - Elsevier
Recent technological advances that allow faster and cheaper DNA sequencing are now
driving biological and medical research. In this review, we provide an overview of state-of …

Aging Atlas: a multi-omics database for aging biology

Nucleic acids research, 2021 - academic.oup.com
Organismal aging is driven by interconnected molecular changes encompassing internal
and extracellular factors. Combinational analysis of high-throughput 'multi-omics' datasets …

[HTML][HTML] A meta-analysis of RNA-Seq studies to identify novel genes that regulate aging

MD Bairakdar, A Tewari, MC Truttmann - Experimental gerontology, 2023 - Elsevier
Aging is a ubiquitous biological process that limits the maximal lifespan of most organisms.
Significant efforts by many groups have identified mechanisms that, when triggered by …

HALL: a comprehensive database for human aging and longevity studies

H Li, S Wu, J Li, Z Xiong, K Yang, W Ye… - Nucleic Acids …, 2024 - academic.oup.com
Diverse individuals age at different rates and display variable susceptibilities to tissue aging,
functional decline and aging-related diseases. Centenarians, exemplifying extreme …

Next generation sequencing in functional genomics

T Werner - Briefings in bioinformatics, 2010 - academic.oup.com
Genome-wide sequencing has enabled modern biomedical research to relate more and
more events in healthy as well as disease-affected cells and tissues to the genomic …

AgeAnno: a knowledgebase of single-cell annotation of aging in human

K Huang, H Gong, J Guan, L Zhang, C Hu… - Nucleic Acids …, 2023 - academic.oup.com
Aging is a complex process that accompanied by molecular and cellular alterations. The
identification of tissue-/cell type-specific biomarkers of aging and elucidation of the detailed …

Gene Aging Nexus: a web database and data mining platform for microarray data on aging

F Pan, CH Chiu, S Pulapura, MR Mehan… - Nucleic acids …, 2007 - academic.oup.com
The recent development of microarray technology provided unprecedented opportunities to
understand the genetic basis of aging. So far, many microarray studies have addressed …

[HTML][HTML] Aging research—where do we stand and where are we going?

L Guarente - Cell, 2014 - cell.com
The 40 th anniversary of Cell coincides with that of the National Institute on Aging (NIA).
Indeed, Cell papers on NIA-funded research helped move the field into a genetic and …

Meta-analysis of age-related gene expression profiles identifies common signatures of aging

JP De Magalhães, J Curado, GM Church - Bioinformatics, 2009 - academic.oup.com
Motivation: Numerous microarray studies of aging have been conducted, yet given the noisy
nature of gene expression changes with age, elucidating the transcriptional features of …

Computational biology for ageing

D Wieser, I Papatheodorou… - … Transactions of the …, 2011 - royalsocietypublishing.org
High-throughput genomic and proteomic technologies have generated a wealth of publicly
available data on ageing. Easy access to these data, and their computational analysis, is of …