Transcription factor effector domains

S Frietze, PJ Farnham - A handbook of transcription factors, 2011 - Springer
The last decade has seen an incredible breakthrough in technologies that allow histones,
transcription factors (TFs), and RNA polymerases to be precisely mapped throughout the …

Histone variants: dynamic punctuation in transcription

CM Weber, S Henikoff - Genes & development, 2014 - genesdev.cshlp.org
Eukaryotic gene regulation involves a balance between packaging of the genome into
nucleosomes and enabling access to regulatory proteins and RNA polymerase …

NET-CAGE characterizes the dynamics and topology of human transcribed cis-regulatory elements

S Hirabayashi, S Bhagat, Y Matsuki, Y Takegami… - Nature …, 2019 - nature.com
Promoters and enhancers are key cis-regulatory elements, but how they operate to generate
cell type-specific transcriptomes is not fully understood. We developed a simple and robust …

Orchestrated response: a symphony of transcription factors for gene control

B Lemon, R Tjian - Genes & development, 2000 - genesdev.cshlp.org
An enormous body of work generated over the past three decades has revealed that
eukaryotic gene transcription is a remarkably intricate biochemical process that is tightly …

The grammar of transcriptional regulation

S Weingarten-Gabbay, E Segal - Human genetics, 2014 - Springer
Eukaryotes employ combinatorial strategies to generate a variety of expression patterns
from a relatively small set of regulatory DNA elements. As in any other language …

From DNA sequence to transcriptional behaviour: a quantitative approach

E Segal, J Widom - Nature Reviews Genetics, 2009 - nature.com
Complex transcriptional behaviours are encoded in the DNA sequences of gene regulatory
regions. Advances in our understanding of these behaviours have been recently gained …

[PDF][PDF] Architectural and functional commonalities between enhancers and promoters

TK Kim, R Shiekhattar - Cell, 2015 - cell.com
With the explosion of genome-wide studies of regulated transcription, it has become clear
that traditional definitions of enhancers and promoters need to be revisited. These control …

[图书][B] Eukaryotic transcription factors

DS Latchman - 2010 - books.google.com
Transcription, or the process by which DNA produces RNA, is a central aspect of gene
expression. Transcription factors regulate transcription during development and in disease …

Pioneer transcription factors: establishing competence for gene expression

KS Zaret, JS Carroll - Genes & development, 2011 - genesdev.cshlp.org
Transcription factors are adaptor molecules that detect regulatory sequences in the DNA
and target the assembly of protein complexes that control gene expression. Yet much of the …

[PDF][PDF] Enhancer function: mechanistic and genome-wide insights come together

JL Plank, A Dean - Molecular cell, 2014 - cell.com
Enhancers establish spatial or temporal patterns of gene expression that are critical for
development, yet our understanding of how these DNA cis-regulatory elements function from …