Cerebral cortical neuron diversity and development at single-cell resolution

MB Johnson, CA Walsh - Current opinion in neurobiology, 2017 - Elsevier
Highlights•Single-cell RNA sequencing revolutionizes systematic classification of neurons.•
Classification by scRNA-seq reveals new neuronal subtypes.•Matching transcriptionally and …

Lessons from single cell sequencing in CNS cell specification and function

Z Li, WA Tyler, TF Haydar - Current opinion in genetics & development, 2020 - Elsevier
Modern RNA sequencing methods have greatly increased our understanding of the
molecular fingerprint of neurons, astrocytes and oligodendrocytes throughout the central …

Disentangling neural cell diversity using single-cell transcriptomics

JF Poulin, B Tasic, J Hjerling-Leffler, JM Trimarchi… - Nature …, 2016 - nature.com
Cellular specialization is particularly prominent in mammalian nervous systems, which are
composed of millions to billions of neurons that appear in thousands of different'flavors' and …

A community-based transcriptomics classification and nomenclature of neocortical cell types

R Yuste, M Hawrylycz, N Aalling, A Aguilar-Valles… - Nature …, 2020 - nature.com
To understand the function of cortical circuits, it is necessary to catalog their cellular
diversity. Past attempts to do so using anatomical, physiological or molecular features of …

Grouping and classifying electrophysiologically-defined classes of neocortical neurons by single cell, whole-genome expression profiling

T Subkhankulova, K Yano, H Robinson… - Frontiers in molecular …, 2010 - frontiersin.org
The diversity of neuronal cell types and how to classify them are perennial questions in
neuroscience. The advent of global gene expression analysis raised the possibility that …

Transcription factor expression defines subclasses of developing projection neurons highly similar to single-cell RNA-seq subtypes

WE Heavner, S Ji, JH Notwell… - Proceedings of the …, 2020 - National Acad Sciences
We are only just beginning to catalog the vast diversity of cell types in the cerebral cortex.
Such categorization is a first step toward understanding how diversification relates to …

Correlating Anatomy and Function with Gene Expression in Individual Neurons by Combining in Vivo Labeling, Patch Clamp, and Single Cell RNA-seq

CK Pfeffer, R Beltramo - Frontiers in Cellular Neuroscience, 2017 - frontiersin.org
The classification of neurons into distinct types is an ongoing effort aimed at revealing and
understanding the diversity of the components of the nervous system. Recently available …

Decoding neuronal diversity in the developing cerebral cortex: from single cells to functional networks

S Mancinelli, S Lodato - Current opinion in neurobiology, 2018 - Elsevier
Highlights•Single-cell transcriptomics is a nearly universal approach to molecularly classify
neurons.•Sampling multiple developmental stages provides insights into the origin of cortical …

From cell types to an integrated understanding of brain evolution: the case of the cerebral cortex

MA Tosches - Annual Review of Cell and Developmental …, 2021 - annualreviews.org
With the discovery of the incredible diversity of neurons, Cajal and coworkers laid the
foundation of modern neuroscience. Neuron types are not only structural units of nervous …

Single-cell sequencing of brain cell transcriptomes and epigenomes

EJ Armand, J Li, F Xie, C Luo, EA Mukamel - Neuron, 2021 - cell.com
Single-cell sequencing technologies, including transcriptomic and epigenomic assays, are
transforming our understanding of the cellular building blocks of neural circuits. By directly …