… RNA velocity has opened up new ways of studying cellular differentiation in single-cell RNA-…
based on the ratio of its spliced and unspliced messenger RNA (mRNA). However, errors in …

… We perform a thorough analysis of RNA velocity methods, with … Finally, we argue for a more
rigorous approach to RNA velocity, … Our findings on RNA velocity have implications for other …

… been made to incorporate RNA velocity, such as projecting RNA velocity into 2D embeddings
to … based on RNA velocity 14 and constructing nearest neighbor graph with RNA velocity. …

… We begin with the formulation of the ‘dynamical’ model of RNA velocity as presented by
ref. . We posit transcriptional states k ∈ {1, 2, 3, 4}, where k = 1 indicates induction, k = 2 …

… cellular dynamics. Here, we review the current state of RNA velocity modeling approaches,
… We then outline future directions on how to generalize the concept of RNA velocity to a …

… Here we show that RNA velocity—the time derivative of the gene expression state—can be
… in common single-cell RNA sequencing protocols. RNA velocity is a high-dimensional vector …

… In Section 3 we will revisit the existing algorithms to infer parameters in RNA velocity models…
models. In Section 4 we focus on the dynamical system analysis based on RNA velocity, …

… Our findings emphasize the importance of choices in the RNA velocity … dynamics using RNA
velocity, particularly in terms of speed. Finally, we emphasize that the use of RNA velocity in …

… We show that cellDancer overcomes the limitations of existing RNA velocity models in
modeling erythroid maturation and hippocampus development. Moreover, cellDancer provides cell…

… inference methods reconstruct cellular dynamics given a population of cells of varying maturity,
RNA velocity relies on a dynamical model describing splicing dynamics. Here, we initially …