PaintOmics is a web server for the integrative analysis and visualisation of multi-omics datasets using biological pathway maps. PaintOmics 4 has several notable updates that …
Abstract iPath3. 0 (http://pathways. embl. de) is a web-application for the visualization and analysis of cellular pathways. It is freely available and open to everyone. Currently it is …
Escher is a web application for visualizing data on biological pathways. Three key features make Escher a uniquely effective tool for pathway visualization. First, users can rapidly …
W Luo, G Pant, YK Bhavnasi… - Nucleic acids …, 2017 - academic.oup.com
Pathway analysis is widely used in omics studies. Pathway-based data integration and visualization is a critical component of the analysis. To address this need, we recently …
Abstract Background Analysis of High Throughput (HTP) Data such as microarray and proteomics data has provided a powerful methodology to study patterns of gene regulation …
K Arakawa, N Kono, Y Yamada, H Mori… - In silico …, 2005 - content.iospress.com
Pathway-level visualization of omics data provides an essential means for systems biology, to capture the systematic properties of the inner activities of cells. Here we describe a web …
N Kono, K Arakawa, R Ogawa, N Kido, K Oshita… - PloS one, 2009 - journals.plos.org
Background Biochemical pathways provide an essential context for understanding comprehensive experimental data and the systematic workings of a cell. Therefore, the …
While generation of high-throughput expression data is becoming routine, the fast, easy, and systematic presentation and analysis of these data in a biological context is still an obstacle …
In this paper, we present KEGGscape a pathway data integration and visualization app for Cytoscape (http://apps. cytoscape. org/apps/keggscape). KEGG is a comprehensive public …