[HTML][HTML] Predicting physiological aging rates from a range of quantitative traits using machine learning

ED Sun, Y Qian, R Oppong, TJ Butler, J Zhao… - Aging (albany …, 2021 - ncbi.nlm.nih.gov
… We also treated PAR as a quantitative trait to perform a genome-wide association study (GWAS)
and to identify genetic variants (ie, single nucleotide polymorphisms, SNPs) significantly …

[HTML][HTML] DNA methylation signatures and the contribution of age-associated methylomic drift to carcinogenesis in early-onset colorectal cancer

JE Joo, M Clendenning, EM Wong, C Rosty… - Cancers, 2021 - mdpi.com
age (early-onset CRC or EOCRC) is currently unknown. In this study, we investigated the
genome-wide DNA methylation … an elevated mitotic rate per given years of age in our EOCRC …

Genome-wide profiling of promoter methylation in human

I Hatada, M Fukasawa, M Kimura, S Morita, K Yamada… - Oncogene, 2006 - nature.com
… intensities on a scanned image were quantified, corrected for background noise, and …
This suggests that our empirical rate of false positives is 6%. We used our threshold criteria …

[HTML][HTML] A meta-analysis on age-associated changes in blood DNA methylation: results from an original analysis pipeline for Infinium 450k data

MG Bacalini, A Boattini, D Gentilini, E Giampieri… - Aging (Albany …, 2015 - ncbi.nlm.nih.gov
statistics for the distribution of number of probes/BOP in the 3 Classes are reported. (B)
Descriptive statistics for … informativeness on genome-wide DNA methylation profiles. Alternative …

[HTML][HTML] DNA methylation age of blood predicts all-cause mortality in later life

RE Marioni, S Shah, AF McRae, BH Chen, E Colicino… - Genome biology, 2015 - Springer
rate for those with higher Δ age . … Genome wide single nucleotide polymorphisms and
exome chip data are also available. DNA methylation measured in subjects at an average age of …

Association of DNA methylation-based biological age with health risk factors and overall and cause-specific mortality

PA Dugué, JK Bassett, JHE Joo… - American journal of …, 2018 - academic.oup.com
… , gallstones, arthritis, and resting heart rate (measured with the Dinamap 1846SX automated
… (25) estimated heritability to be 0.65 using genome-wide complex trait analysis. Li et al. (56) …

Epigenome-wide change and variation in DNA methylation in childhood: trajectories from birth to late adolescence

RH Mulder, A Neumann, CAM Cecil… - Human molecular …, 2021 - academic.oup.com
… of genome-wide DNAm trajectories across this age period is … in girls at birth but DNAm
in boys increased at a higher rate. … We looked up methylation quantitative trait loci in cis (cis …

[HTML][HTML] Aging and environmental exposures alter tissue-specific DNA methylation dependent upon CpG island context

BC Christensen, EA Houseman, CJ Marsit… - PLoS …, 2009 - journals.plos.org
genome-wide studies of methylation in normal human … , and the misclassification error rate
for each sample type (Table 2… Bead arrays have a similar sensitivity as quantitative methylation

Racial differences in genome-wide methylation profiling and gene expression in breast tissues from healthy women

MA Song, TM Brasky, C Marian, DY Weng, C Taslim… - Epigenetics, 2015 - Taylor & Francis
… Hochberg False Discovery Rate (FDR) with significantly differential methylation defined at
corrected P … Age-associated gene expression in normal breast tissue mirrors qualitative age-at-…

[HTML][HTML] Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers

A Decock, M Ongenaert, J Hoebeeck, K De Preter… - Genome biology, 2012 - Springer
… , the age at diagnosis was tested using two different age cutoffs… less methylation events
showed better survival rates than … ) as we do not assess methylation in a quantitative way. After in …