… In this paper, we describe enoLOGOS, a tool developed primarily for converting energy or
… to normalized sequence logos ( e nergy no rmalized logos ). In addition, enoLOGOS can …

… of these tools substantially limits the kinds of logos that one … Shown is an energy matrix for
the transcription factor CRP; the elements … (B) An energy logo for CRP created by passing the …

… Only a handful of tools like CorreLogo, enoLOGOS, and ELRM … using three-dimensional
sequence logos generated via VRML … c tRNA motif logo generated from enoLOGOS using the …

… Existing MSA visualization tools [5] continue to use a simple stacked sequence alignment …
For each panel, the color shading is normalized to the number of sequences in each alignment …

… The enoLOGOS server generates a monochromatic plot … , a matrix of interaction energies
of different nucleotide types with a … The 3D sequence logos provide a useful tool for analyzing …

… the versatility of visualization methods supported by the web … sequence logo (upper left
corner), as a filled sequence logo (… concerning the processing site than a sequence logo alone. …

… Sequence logos are useful tools for visual display of conservation and variability in a … immune
epitopes and various sequence motifs. To our knowledge, it is the first logo web server that …

… sequence logo generators like Weblogo and ENOlogos. Besides the conventional Shannon
sequence logo… important and novel tool for non-expert users to construct accurate sequence …

… Logo is a web-based tool that detects and displays statistically significant differences in
position-specific symbol compositions between two sets of multiple sequence … normalization …

… However, the methods for logo generation in common use … Results: We redefine the
information at a logo position as a per… Within this framework, we propose distinct normalized …