pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang, L Li… - …, 2020 - academic.oup.com
Motivation Enzymatic digestion of proteins before mass spectrometry analysis is a key
process in metaproteomic workflows. Canonical metaproteomic data processing pipelines …

pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang… - Bioinformatics …, 2020 - pubmed.ncbi.nlm.nih.gov
Motivation Enzymatic digestion of proteins before mass spectrometry analysis is a key
process in metaproteomic workflows. Canonical metaproteomic data processing pipelines …

pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies.

C Simopoulos, Z Ning, X Zhang, L Li, K Walker… - …, 2020 - search.ebscohost.com
Motivation Enzymatic digestion of proteins before mass spectrometry analysis is a key
process in metaproteomic workflows. Canonical metaproteomic data processing pipelines …

[PDF][PDF] pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang, L Li - Bioinformatics, 2020 - caitlinsimopoulos.com
Motivation: Enzymatic digestion of proteins before mass spectrometry analysis is a key
process in metaproteomic workflows. Canonical metaproteomic data processing pipelines …

pepFunk, a tool for peptide-centric functional analysis in metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang, L Li, K Walker… - bioRxiv, 2019 - biorxiv.org
Enzymatic digestion of proteins before mass spectrometry analysis is a key process in
metaproteomic workflows. Canonical metaproteomic data processing pipelines typically …

pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies.

CMA Simopoulos, Z Ning, X Zhang, L Li… - Bioinformatics (Oxford …, 2020 - europepmc.org
Results To combat this challenge, we developed pepFunk, a peptide-centric metaproteomic
workflow focused on the analysis of human gut microbiome samples. Our workflow includes …

pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang, L Li… - …, 2020 - academic.oup.com
Motivation Enzymatic digestion of proteins before mass spectrometry analysis is a key
process in metaproteomic workflows. Canonical metaproteomic data processing pipelines …

[PDF][PDF] pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang, L Li - Bioinformatics, 2020 - researchgate.net
Motivation: Enzymatic digestion of proteins before mass spectrometry analysis is a key
process in metaproteomic workflows. Canonical metaproteomic data processing pipelines …

pepFunk, a tool for peptide-centric functional analysis in metaproteomic human gut microbiome studies

CM Simopoulos, Z Ning, X Zhang, L Li, K Walker… - 2019 - europepmc.org
Enzymatic digestion of proteins before mass spectrometry analysis is a key process in
metaproteomic workflows. Canonical metaproteomic data processing pipelines typically …

pepFunk, a tool for peptide-centric functional analysis in metaproteomic human gut microbiome studies

CMA Simopoulos, Z Ning, X Zhang, L Li, K Walker… - bioRxiv, 2019 - biorxiv.org
Enzymatic digestion of proteins before mass spectrometry analysis is a key process in
metaproteomic workflows. Canonical metaproteomic data processing pipelines typically …