Data-driven materials research enabled by natural language processing and information extraction

EA Olivetti, JM Cole, E Kim, O Kononova… - Applied Physics …, 2020 - pubs.aip.org
… and practices of natural language processing and text mining of … of natural language
processing for materials, including data compilation, hypothesis development, and understanding

The 2019 National Natural language processing (NLP) Clinical Challenges (n2c2)/Open Health NLP (OHNLP) shared task on clinical concept normalization for …

S Henry, Y Wang, F Shen, O Uzuner - Journal of the American …, 2020 - europepmc.org
semantic types. MDQ built their system using the UIMA 64 framework with Lucene indexing.
Candidate CUIs were retrieved via dictionary lookup. Candidates were ranked using ML. …

[HTML][HTML] Extracting family history information from electronic health records: natural language processing analysis

M Rybinski, X Dai, S Singh, S Karimi… - JMIR Medical …, 2021 - medinform.jmir.org
… automated methods that enable access to FH data through natural language processing. …
task data set from the National Natural Language Processing Clinical Challenges (N2C2), …

A pre-trained BERT for Korean medical natural language processing

Y Kim, JH Kim, JM Lee, MJ Jang, YJ Yum, S Kim… - Scientific Reports, 2022 - nature.com
framework used in BERT to train KM-BERT for medical … Finally, we acquired the Korean
medical semantic textual … into Korean using the Python library of Google Machine Translation. …

Health Data Science and Semantic Technologies

H Ayatollahi - Data Science with Semantic Technologies …, 2022 - Wiley Online Library
… unstructured clinical data such as discharge summaries, progress reports and nursing notes
can be analyzed by natural language processing (NLP) for different purposes. Physiological …

Looking through glass: Knowledge discovery from materials science literature using natural language processing

V Venugopal, S Sahoo, M Zaki, M Agarwal… - Patterns, 2021 - cell.com
… Here, we present a framework employing natural language processing, which automates
text and image comprehension and precision knowledge extraction from inorganic glasses’ …

Natural language processing in oncology: a review

W Yim, M Yetisgen, WP Harris, SW Kwan - JAMA oncology, 2016 - jamanetwork.com
Natural language processing systems can be evaluated using various metrics, some of
which are familiar to those in medicine and biomedical research. Three commonly used metrics …

A natural language processing framework to analyse the opinions on HPV vaccination reflected in twitter over 10 years (2008-2017)

X Luo, G Zimet, S Shah - Human vaccines & immunotherapeutics, 2019 - Taylor & Francis
biomedical text analysis. Citation12 One advantage of word embeddings is that it discovers
the semantic … phrase embeddings Citation11 to discover the associations between phrases …

A generate-and-rank framework with semantic type regularization for biomedical concept normalization

D Xu, Z Zhang, S Bethard - … of the 58th annual meeting of the …, 2020 - aclanthology.org
… for data interoperability and the development of natural language processing (NLP) techniques.
For … about biomedical entities, their synonyms, semantic types and mutual relationships. …

Natural language processing systems for capturing and standardizing unstructured clinical information: a systematic review

K Kreimeyer, M Foster, A Pandey, N Arya… - Journal of biomedical …, 2017 - Elsevier
… For the publication retrieval phase, we coordinated with a reference librarian at the FDA
Library … Bio-LarK Concept Recognizer A semantic concept retrieval system that can process