… human cell types To identify accessiblechromatin regions in each of the 111 cell types, we aggregated chromatinaccessibility … We then merged these accessiblechromatin regions to …
… Most single-nucleotide polymorphisms (SNPs) in the humangenome occur in non-coding and intergenic genomic regions and individually contribute small or indirect effects to complex …
… The chromatinlandscape at the local level—the focus of this Review (Box 2)—is dominated by the alternation of nucleosomes and linkers, interspersed with nucleosome-free regions …
F Grubert, R Srivas, DV Spacek, M Kasowski… - Nature, 2020 - nature.com
… The development of high-throughput chromatin conformation assays (for example, Hi-C 1 … 3D organization of the humangenome and how it influences gene regulation. Topologically …
L Gao, K Wu, Z Liu, X Yao, S Yuan, W Tao, L Yi, G Yu… - Cell, 2018 - cell.com
… of the chromatin regulatory landscape during human early … report that the chromatin accessibility landscape is gradually established … In the humangenome, only a small percentage of …
… profiling methods may serve as an analytic foundation to identify regulatory regions, it is reported that often less than 50% of accessible regions in humanDNA are active as enhancers …
… regions that we identified spans 17% of the humangenome, which is in line with recent bulk DNase-seq profiles from fetal tissues (91). Most of these ~1 million elements are cell type–…
J Wu, BO Huang, HE Chen, Q Yin, Y Liu, Y Xiang… - Nature, 2016 - nature.com
… chromatinlandscape and its dynamics in this period remain unexplored. Here we report a genome-wide map of accessiblechromatin in … for transposase-accessiblechromatin with high …
… We used humangenome version hg19; mouse genome version mm10; dog … 100–200 bp) DNA fragments. They indicate open or accessiblechromatin where DNA is not tightly wrapped …