… genome sequencing using ONT can allow strain-level identification and tracking of pathogens
or … monitored for pathogens using swabs and qualitative rapid pathogen testing. When …

… foodborne illnesses and outbreak investigations [24]. WGS is being used to monitor and identify
foodborne pathogens [… and detection limit of nanopore sequencing on STEC enrichment …

… Since the dominance of either of these bacteria was obvious in the pre-market stage of
collection, we hypothesize the natural fermentation process as the protective state of this product, …

… can detect and subtype foodborne pathogens in a single … (MDA), and nanopore
sequencing real-time analysis for … 1 h of sequencing in a nanopore sequencer. Flour samples …

… Foodborne pathogens mainly comprise the bacteria and fungi that have been frequently
reported for the foodborne illnesses through consumption of spoiled food as well as epidemic …

… resistant strains from various foodborne pathogens, such as … whole genome sequencing
(WGS) of bacterial pathogens for … or non-cultivable microorganisms, and therefore could assist …

… a foodborne outbreak investigation, 2) important clues about the long-term evolution of enteric
pathogens, 3) … identification of viral pathogens in clinical samples by real-time nanopore …

… the transmission of foodborne pathogens across international … as a single strand through
the nanopore. Base calling is then … 16S rDNA sequencing is the ability to characterize bacteria …

… monocytogenes, 14 ST6 isolates were selected, six of which were associated with a
suspected foodborne outbreak that occurred in 2020. Routine surveillance using Illumina …

… Nanopore sequencing, a MinION sequencing library was prepared using the Nanopore
Ligation Sequencing … to inhibit protein synthesis in bacteria. Previous studies showed resistance …