Application of an automated natural language processing (NLP) workflow to enable federated search of external biomedical content in drug discovery and …

R McEntire, D Szalkowski, J Butler, MS Kuo… - Drug discovery today, 2016 - Elsevier
Highlights•Medline, ClinicalTrials. gov and other sites offer search portal access to the latest
information.•The limited synonyms on the portals hinder efficient and effective searches.•An …

BIOMedical Search Engine Framework: lightweight and customized implementation of domain-specific biomedical search engines

AG Jácome, F Fdez-Riverola, A Lourenço - computer methods and …, 2016 - Elsevier
Background and objectives Text mining and semantic analysis approaches can be applied
to the construction of biomedical domain-specific search engines and provide an attractive …

Applications of advanced natural language processing for clinical pharmacology

JC Hsu, M Wu, C Kim, B Vora, YT Lien… - Clinical …, 2024 - Wiley Online Library
Natural language processing (NLP) is a branch of artificial intelligence, which combines
computational linguistics, machine learning, and deep learning models to process human …

Advanced literature-mining tools

P Zweigenbaum, D Demner-Fushman - Bioinformatics: Tools and …, 2009 - Springer
The complexity and wide range of current biomedical research is reflected in the number
and scope of biomedical publications. Due to this abundance scientists are often no longer …

Big pharma reads big data, sees big picture: Linguamatics brings natural language processing to non-experts, expediting drug development

G Dutton - Genetic Engineering & Biotechnology News, 2018 - liebertpub.com
Gail Dutton hen Eli Lilly needed to extract data from clinical trial reports, it used an artificial
intelligence (AI) approach called natural language processing (NLP) to replace manual …

[HTML][HTML] TPX: Biomedical literature search made easy

T Joseph, VG Saipradeep, GSV Raghavan… - …, 2012 - ncbi.nlm.nih.gov
TPX is a web-based PubMed search enhancement tool that enables faster article searching
using analysis and exploration features. These features include identification of relevant …

Semantic biomedical resource discovery: a Natural Language Processing framework

P Sfakianaki, L Koumakis, S Sfakianakis… - BMC medical informatics …, 2015 - Springer
Background A plethora of publicly available biomedical resources do currently exist and are
constantly increasing at a fast rate. In parallel, specialized repositories are been developed …

Natural language processing–assisted literature retrieval and analysis for combination therapy in cancer

J Zeng, CX Cruz Pico, T Saridogan… - JCO Clinical Cancer …, 2022 - ascopubs.org
PURPOSE Despite advances in molecular therapeutics, few anticancer agents achieve
durable responses. Rational combinations using two or more anticancer drugs have the …

[PDF][PDF] Life-inet: A structured network-based knowledge exploration and analytics system for life sciences

X Ren, J Shen, M Qu, X Wang, Z Wu… - Proceedings of ACL …, 2017 - aclanthology.org
Search engines running on scientific literature have been widely used by life scientists to
find publications related to their research. However, existing search engines in the life …

Exploring chemical space using natural language processing methodologies for drug discovery

H Öztürk, A Özgür, P Schwaller, T Laino… - Drug Discovery Today, 2020 - Elsevier
Highlights•Biochemical data can be represented with text-based languages codified by
humans.•Natural language processing (NLP) can be applied to textual biochemical …