Modeling the expansion of virtual screening libraries

J Lyu, JJ Irwin, BK Shoichet - Nature chemical biology, 2023 - nature.com
… expect these new ultra-large libraries, and the hits … natural products and drugs observed in
the ‘in-stock’ libraries. Since we know the identity of every molecule screened in these libraries

Virtual screening in drug discovery

AR Patel, HB Patel, SK Mody, RD Singh… - Journal of Veterinary …, 2021 - indianjournals.com
… to develop products with commercial value … Virtual screening (VS) strategies have innovated
the discovery of novel bioactive molecules by in silico method from large compound libraries

Applications of virtual screening in bioprospecting: facts, shifts, and perspectives to explore the chemo-structural diversity of natural products

K Santana, LD Do Nascimento, A Lima e Lima… - Frontiers in …, 2021 - frontiersin.org
… in the Virtual Screening of Bioactive Compounds Virtual screening methods have innovated
… , assessing in silico large structural libraries against a bioreceptor or biological system, thus …

QSAR-based virtual screening of natural products database for identification of potent antimalarial hits

LT Ferreira, JVB Borba, JT Moreira-Filho, A Rimoldi… - Biomolecules, 2021 - mdpi.com
natural products libraries link virtual screening campaigns to the benefits of natural product-…
of the present study was to develop a virtual screening pipeline for identifying potent natural

Application of negative design to design a more desirable virtual screening library

ZY Yang, JH He, AP Lu, TJ Hou… - Journal of Medicinal …, 2020 - ACS Publications
… Negative design is a group of virtual screening methods that aims at … These methods are
mainly designed to predict three … high screening efficiency, most negative design methods are …

A graph-based approach to construct target-focused libraries for virtual screening

M Naderi, C Alvin, Y Ding, S Mukhopadhyay… - Journal of …, 2016 - Springer
… eSynth opens up a possibility to rapidly construct virtual screening libraries for targeted drug
libraries for virtual screening, we developed eSynth, a new fragment-based approach to …

New trends in virtual screening

WP Walters, R Wang - Journal of chemical information and …, 2020 - ACS Publications
… One remedy for improving the performance of virtual screening methods is to … virtual screening.
One limiting factor in the application of free energy calculations to large chemical libraries

… , virtual screening, molecular docking, ADMET, and molecular dynamics (MD) simulation of potential inhibitors of PD-L1 from the library of marine natural products

L Luo, A Zhong, Q Wang, T Zheng - Marine Drugs, 2021 - mdpi.com
natural products were virtually screened by targeting PD-L1. In order to predict a variety of
marine natural productsnatural products to perform virtual screening of PD-L1 detection sites. …

Virtual screening of natural products against 5-enolpyruvylshikimate-3-phosphate synthase using the Anagreen herbicide-like natural compound library

MVD de Oliveira, GMB Fernandes, KS da Costa… - RSC …, 2022 - pubs.rsc.org
natural origin. In this work, we present a hierarchical ligand- and structure-based virtual
screening approachlibrary AHL. This study explores the molecular chemo-structural diversity of …

Virtual screening of natural products inspired in-house library to discover potential lead molecules against the SARS-CoV-2 main protease

A Garg, N Goel, N Abhinav, T Varma… - Journal of …, 2023 - Taylor & Francis
… -based virtual screening technique by using the Schrödinger suite. A total of 150 molecules
have been shortlisted from our in-house library of synthetic and natural products based on …