… of SVs on the 3D chromatin organization of the human genome, we pay a specific attention
to chromatin interactions associated with enhancer regions and gene promoters. These …

… of genomic assays in the Mount Sinai Brain Bank AD (MSBB-AD) cohort 9 . In particular, we
generated genome-wide maps of chromatin accessibility … 79 to human genome hg38 using …

… However, the memory density of the human genome in the nucleus can be calculated as
∼7.5 × 10 14 bytes/mm 3 , considering that the nuclear volume is roughly 1000 µm 3 . This …

… scChIP-seq enables the clustering of cell populations based on the diversity of the chromatin
landscape and the identification of chromatin features specific to each population, such as …

… Nucleosomes and chromatin control eukaryotic genome accessibility and thereby regulate
DNA processes, including transcription, replication, and repair. Conformational dynamics …

… and distance to gene TSS in the human genome: OCRs that do not change chromatin
accessibility between 14 gw and 18 gw in the PFC, OCRs that gained accessibility from 14 gw to …

… , we performed genome-wide studies of chromatin accessibility, DNA methylation, and …
human erythroid cells. The integration of gene expression, DNA methylation, and chromatin state …

… To evaluate the ability of SNARE-seq to capture accessible chromatin, we first performed a
… characterized chromatin landscapes. Ensemble profiles of SNARE-seq accessibility data …

… We bin the human genome (GRCh37 assembly) into 200 bp bins (⁠ i ⁠) every 50 bp. For
each of the 123 cellular contexts (⁠ j = { 1 … 123 } ⁠), all bins are assigned binary labels (⁠ y i …

… 3) We further required that the human gene Ensembl ID mapped uniquely to one mouse
Ensembl ID. 4) Finally, we considered only autosomes, because of the mixed-gender litter pools …