… version 4.0 of the eggNOG database [23], which provides non-supervised orthologous groups
for 2031 species across … of nested taxonomic levels, in this example from Saccharomyceta …

… we first introduced eggNOG database and KEGG ORTHOLOGY (KO) database for orthologous
(… is typically a hypothetical protein, the organisms from which such protein is derived from …

… of animals, plants, and microorganisms such as … ) (Table 4 and Table S1, Figure 1B). In
addition, 41,771 full-length transcripts were annotated to 25 functional categories in the eggNOG …

… eggNOG MPRs were substantially smaller than KEGG MPRs in 3 out of 6 environments (human,
other animals … on the organism having or lacking a specific gene (KEGG ortholog). For …

… of biological knowledge between organisms. Given the … through heuristic analyses of
pairwise sequence similarity scores (or expectation values) obtained from an all-vs-all BLAST [4] …

… the male animals had high abundances of Bacteroides, whereas female animals were enriched
… separately via BLAST against the KEGG, EggNOG, CAZy, and CARD databases using …

… 4b). All these annotated eggNOG class can be found in S4. … In summary, the diversity
of microorganisms in yak uteri is associated with different reproductive states. Additionally, …

… across the globe has revealed micro-organisms … to 21 eggNOG categories with their relative
abundance after alignment of the genes with eggnog v4.1 database and assigning eggNOG …

… The frequent use of antibiotics in livestock animals and humans … eggNOG database is
regarded as a significant public resource for functional annotation and is based on orthologous …

… microorganisms present in the digestive system of animals, … microorganisms provide effective
energy for muskrats over … based on the KEGG and eggNOG databases. The results of the …