… analysis in the Bayesianframework becomes a natural choice for SNP-level colocalization analysis; … Informed by our real dataanalysis of 4,091 GWAS traits and the eQTL data from the …
… traits simultaneously (eg 100 traits can be jointly analysed in around 1 s). We perform a genome-wide multi-traitcolocalizationanalysis … association signals using summarystatistics on …
EA King, F Dunbar, JW Davis, JF Degner - BMC bioinformatics, 2021 - Springer
… When applied to the full GWAS Catalog and GTEx eQTL, we find that colocalizedtrait-gene pairs are enriched in tissues relevant to disease etiology and for matches to approved drug …
C Wallace - PLoS genetics, 2021 - journals.plos.org
… We repeatedly simulated GWAS summarydata for a single trait with one or two causal … data for two traits, such that each trait had one or two causal variants and each pair of traits shared …
S Pan, H Kang, X Liu, S Li, P Yang, M Wu… - Nucleic Acids …, 2024 - academic.oup.com
… summarystatisticsdata curation and process We collected GWAS summarystatistics for complex traits … So far, we have curated a total of 3189 GWAS summarystatistics datasets mainly …
C Wallace - PLoS genetics, 2020 - journals.plos.org
… Bayesiancolocalisationanalysis that hitherto have not received detailed attention. The ability of Bayesian … single traitassociation, p 1 , p 2 , are well supported by data across a range of …
Y Deng, W Pan - PLoS computational biology, 2020 - journals.plos.org
… summarystatistics from genome-wide association studies for all the traits, which is important for multi-traitanalysis … applies to multipletraits with only summarystatistics based on one or …
T Zhang, A Klein, J Sang, J Choi… - Genomics, Proteomics …, 2022 - academic.oup.com
… We recognize that the colocalization results for two traits in the same locus might be … interactively visualize and analyze genetic associationdata and perform colocalization between two …
… correlation test results within a formal Bayesianframework. Specifically, we take the TWAS … To analyze the simulated data, we perform eQTL and GWAS finemapping analysis using …