Single-cell RNA-seq analysis of mouse preimplantation embryos by third-generation sequencing

X Fan, D Tang, Y Liao, P Li, Y Zhang, M Wang… - PLoS …, 2020 - journals.plos.org
… not be detected by NGS platform-based single-cell RNA-seq … from 9,338 genes in the
mouse preimplantation embryos, and … They are also reported to be involved in early embryonic

Single cell RNA-seq reveals genes vital to in vitro fertilized embryos and parthenotes in pigs

ZQ Du, H Liang, XM Liu, YH Liu, C Wang, CX Yang - Scientific reports, 2021 - nature.com
… of gene involvement in oocyte maturation and early embryo … regulatory gene network
potentially underlying early embryo … factors (TFs) in both IVF and PA embryos (Fig. 6C; Table S12)…

[HTML][HTML] The changing mouse embryo transcriptome at whole tissue and single-cell resolution

P He, BA Williams, D Trout, GK Marinov, H Amrhein… - Nature, 2020 - nature.com
… using single-cell RNA-seq (sequencing of RNA reverse … dominate at both the gene and
cellular levels, jointly … promoter data; we detected 97% of its 13,999 protein coding genes, plus an …

Singlecell RNASeq reveals a highly coordinated transcriptional program in mouse germ cells during primordial follicle formation

Y He, Q Chen, J Dai, Y Cui, C Zhang, X Wen, J Li… - Aging …, 2021 - Wiley Online Library
… or maternal factors that are important for ovulation or early embryonic development such …
single-cell RNA sequencing data reported in this paper have been deposited in NCBI’s Gene

Single-cell transcriptomic characterization of a gastrulating human embryo

RCV Tyser, E Mahammadov, S Nakanoh, L Vallier… - Nature, 2021 - nature.com
single-cell RNA sequencing (scRNA-seq), we sub-dissected the embryo into the yolk sac,
rostral embryonic … cells with more than 2,000 detected genes, with overall mapping rate greater …

[PDF][PDF] Parallel single-cell RNA-seq and genetic recording reveals lineage decisions in developing embryoid bodies

IS Kim, J Wu, GJ Rahme, S Battaglia, A Dixit, E Gaskell… - Cell reports, 2020 - cell.com
single-cell transcriptomics and genetic recording to characterize EB differentiation. We map
transcriptional states along a time courseearly embryonic derivation for erythroidlike cells. …

Similarities between bovine and human germline development revealed by single-cell RNA sequencing

DA Soto, PJ Ross - Reproduction, 2021 - rep.bioscientifica.com
… By performing single-cell RNA-sequencing, quantitative real-… early stages of development,
expressing genes of early primordial germ cells, including transcriptional regulators of human

[PDF][PDF] Single-cell RNA sequencing of human, macaque, and mouse testes uncovers conserved and divergent features of mammalian spermatogenesis

AN Shami, X Zheng, SK Munyoki, Q Ma, GL Manske… - Developmental cell, 2020 - cell.com
… with our previously published mouse single-cell data (Green et al., … genes, we uncovered
both known and understudied cell types, including transient cell states too rare to be detected

Single cell RNA-sequencing reveals cellular heterogeneity and trajectories of lineage specification during murine embryonic limb development

NH Kelly, NPT Huynh, F Guilak - Matrix Biology, 2020 - Elsevier
… However, such single-cell data has not been reported for the … during mouse limb development
via single cell RNA-sequencing … We detected the expression of an average of 2700 genes

Embryonic liver developmental trajectory revealed by single-cell RNA sequencing in the Foxa2eGFP mouse

T Mu, L Xu, Y Zhong, X Liu, Z Zhao, C Huang… - Communications …, 2020 - nature.com
… of the liver and gallbladder in the early embryonic stages is not fully … single-cell RNA-sequencing
data for mouse embryos analyzed in this study can be downloaded from the NCBI Gene