[HTML][HTML] Human cytomegalovirus genome diversity in longitudinally collected breast milk samples

J Götting, K Lazar, NM Suárez, L Steinbrück… - Frontiers in cellular …, 2021 - frontiersin.org
HCMV-specific target enrichment and high-throughput … with human cytomegalovirus (HCMV;
species Human … family Herpesviridae, are highly prevalent in people worldwide and result …

Human cytomegalovirus multiple-strain infections and viral population diversity in haematopoietic stem cell transplant recipients analysed by high-throughput …

A Dhingra, J Götting, PR Varanasi… - Medical Microbiology …, 2021 - Springer
… ) and thus to analyse the extent of HCMV genome diversity and its potential impact on clinical
… Similarly, extensive HCMV strain variability among different individuals with high intrahost …

Genomic and geographical structure of human cytomegalovirus

OJ Charles, C Venturini, S Gantt… - Proceedings of the …, 2023 - National Acad Sciences
… We highlight examples of where our approach can help to provide insights for further …
To characterize CMV genomic diversity, we first aligned the genomes and then calculated …

[HTML][HTML] Whole-genome approach to assessing human cytomegalovirus dynamics in transplant patients undergoing antiviral therapy

NM Suárez, E Blyth, K Li, T Ganzenmueller… - Frontiers in cellular …, 2020 - frontiersin.org
… , we applied high-throughput sequencing coupled with HCMV-… These findings highlight the
importance of monitoring … present at low level may become prevalent at later stages due to …

Past and ongoing adaptation of human cytomegalovirus to its host

A Mozzi, M Biolatti, R Cagliani, D Forni… - PLoS …, 2020 - journals.plos.org
… on the functional effect of HCMV genetic diversity and we define … Extensive analysis of
antibody responses indicated that … changes in genomic regions, thus highlighting the presence of …

Evolution and genetic diversity of primate cytomegaloviruses

R Cagliani, D Forni, A Mozzi, M Sironi - Microorganisms, 2020 - mdpi.com
Human cytomegalovirus (HCMV) is an important opportunistic … More recently, the
development of highthroughput … is highly prevalent [18], the first four complete HCMV genome

GRACy: A tool for analysing human cytomegalovirus sequence data

S Camiolo, NM Suarez, A Chalka, C Venturini… - Virus …, 2021 - academic.oup.com
HCMV genomics has been significantly advanced in recent years by high-throughput
variation among HCMV strains, had previously required extensive manual intervention. The variant …

Identifying high-confidence variants in human cytomegalovirus genomes sequenced from clinical samples

S Camiolo, J Hughes, F Baldanti, M Furione… - Virus …, 2022 - academic.oup.com
… in high-throughput sequencing. However, the underlying … on the basis of extensive
experimentation. The effects on read … be drawn about the intrahost genetic diversity of viruses. In …

Cytomegalovirus genetic diversity following primary infection

SA Ross, P Pati, TL Jensen, JB Goll… - The Journal of …, 2020 - academic.oup.com
… Because CMV has a large genome with extensive variability within many gene regions and
only a limited number of clones were sequenced to determine genotypes of gN, US28, and …

High-throughput sequencing (HTS) for the analysis of viral populations

M Pérez-Losada, M Arenas, JC Galán… - Infection, Genetics and …, 2020 - Elsevier
… In this review, we describe new technologies and provide guidelines for the high-throughput
sequencing and genetic and evolutionary analyses of viral populations and metaviromes, …