Machine learning techniques for biomedical natural language processing: a comprehensive review

EH Houssein, RE Mohamed, AA Ali - IEEE Access, 2021 - ieeexplore.ieee.org
… and detecting semanticbiomedical NLP systems and their tasks are illustrated below,
which are how NLP tools incorporated into a pipeline designed on top of a particular framework

Semantic and NLP‐Based Retrieval From Covid‐19 Ontology

R Kaladevi, A Revathi - Machine Learning for Healthcare …, 2021 - Wiley Online Library
… between similar systems, reusing of knowledge base, effective information retrieval from
developed ontology using semantic query languages and Natural language queries. …

How can natural language processing help model informed drug development?: a review

R Bhatnagar, S Sardar, M Beheshti, JT Podichetty - JAMIA open, 2022 - academic.oup.com
… Relation extraction It is the task of extracting structured information and semantic
relations from natural language text between 2 or more entities of a certain type like person, …

Natural language processing for health-related texts

D Demner-Fushman, N Elhadad… - Biomedical Informatics …, 2021 - Springer
Natural language processing (NLP) techniques seek to analyze narrative text to make these
… infer semantics. Machine-learning methods are now being applied that can infer semantics

A survey on event extraction for natural language understanding: Riding the biomedical literature wave

G Frisoni, G Moro, A Carbonaro - IEEE Access, 2021 - ieeexplore.ieee.org
… as semantic units and a rich literature taxonomy. In doing this, we focus on the biomedical
… the the research gap between biomedical and non-biomedical EE. Section V presents EE …

Natural language processing algorithms for mapping clinical text fragments onto ontology concepts: a systematic review and recommendations for future studies

MG Kersloot, FJP van Putten, A Abu-Hanna… - … of biomedical semantics, 2020 - Springer
Natural Language Processing (NLP) algorithms can make free text machine-interpretable
by attaching ontology concepts to it. However, implementations of NLP algorithms are not …

Domain-specific language model pretraining for biomedical natural language processing

Y Gu, R Tinn, H Cheng, M Lucas, N Usuyama… - ACM Transactions on …, 2021 - dl.acm.org
Pretraining large neural language models, such as BERT, has led to impressive gains on
many natural language processing (NLP) tasks. However, most pretraining efforts focus on …

Broad-coverage biomedical relation extraction with SemRep

H Kilicoglu, G Rosemblat, M Fiszman, D Shin - BMC bioinformatics, 2020 - Springer
… of information overload, natural language processing (NLP) … extracts semantic relations from
PubMed abstracts using linguistic … The theoretical framework of SemRep, with its increased …

Natural language processing

J Vasilakes, S Zhou, R Zhang - Machine learning in cardiovascular …, 2021 - Elsevier
… The Semantic Network consists of a set of broad subject categories (ie, semantic types) and
relationships (ie, semantic relations) between these semantic types. The SPECIALIST suite …

Improving broad-coverage medical entity linking with semantic type prediction and large-scale datasets

S Vashishth, D Newman-Griffis, R Joshi, R Dutt… - Journal of biomedical …, 2021 - Elsevier
Biomedical natural language processing tools are … a novel semantic type prediction module
for biomedical NLP … neural language modeling frameworks to identify the semantic type of a …