Targeted and untargeted proteomics approaches in biomarker development

CA Sobsey, S Ibrahim, VR Richard, V Gaspar… - …, 2020 - Wiley Online Library
… to dramatically improve sample throughput without reducing proteome coverage in the
context of untargeted proteome profiling.80 PASEF was recently demonstrated to enable the …

Comparative Proteome Analyses of Ureteropelvic Junction Obstruction and Surrounding Ureteral Tissue

U Görmüş, M Kasap, G Akpınar, H Tuğtepe… - Cells Tissues …, 2020 - karger.com
… In this study, the proteome profiles of the obstructed segment and its surrounding distal and
… In characteristic asthma cases, airway smooth muscle hypertrophy and hyperplasia leads to …

The role of proteomics in the multiplexed analysis of gene alterations in human cancer

N Babu, MY Bhat, AE John… - … Review of Proteomics, 2021 - Taylor & Francis
… protein turnover and increase the depth of proteome profiling [Citation19], demonstrating
that … However, the increased levels of PSA are also reported in benign prostatic hyperplasia (…

Profiling of urinary extracellular vesicle protein signatures from patients with cribriform and intraductal prostate carcinoma in a cross-sectional study

R Matthiesen, A Carvalho, R Leão, R Sayyid, H Pereira… - 2024 - researchsquare.com
… non-invasive target to unveil proteomic signatures of IDC and Crib PCa patterns, allowing
the identi cation of a urinary biomarker protein signature for patients with Crib and IDC. Indeed…

Differential Proteome Profiling Analysis under Pesticide Stress by the Use of a Nano-UHPLC-MS/MS Untargeted Proteomic-Based Approach on a 3D-Developed …

K Louati, A Maalej, F Kolsi, R Kallel… - Journal of Proteome …, 2023 - ACS Publications
… The aim of this study is to reveal changes in proteome profiles under stressful conditions
to … Furthermore, we adopted an untargeted proteomic-based approach with high-resolution …

Proteomic sift through serum and endometrium profiles unraveled signature proteins associated with subdued fertility and dampened endometrial receptivity in women …

N Rashid, A Nigam, SK Jain, SH Naqvi, S Wajid - Cell and tissue research, 2020 - Springer
… Serum proteome profiles of PCOS with infertility and fertile control … hyperplasia in PCOS
females. Integration of this information with already existing data from different proteomic

DIA proteomics analysis through serum profiles reveals the significant proteins as candidate biomarkers in women with PCOS

Y Yu, P Tan, Z Zhuang, Z Wang, L Zhu, R Qiu… - BMC medical …, 2021 - Springer
… DIA proteomics analysis, we provided evidence of serum proteomic profile alterations in …
80 proteins were significantly differentially expressed between PCOS patients and controls, …

Longitudinal skin tape strip global proteomic assessment reveals normalization of epidermal development in atopic dermatitis patients treated with dupilumab

E Goleva, E Berdyshev, S Kreimer… - Journal of Allergy and …, 2023 - jacionline.org
… Skin proteomic profiles were correlated with AD clinical parameters (SCORAD, EASI)
and … Functionally, cluster 1 proteins were enriched for markers of epidermal hyperplasia—…

Recent progress in mass spectrometry-based urinary proteomics

N Joshi, K Garapati, V Ghose, RK Kandasamy… - Clinical Proteomics, 2024 - Springer
profiling of urine has led to the discovery of several disease-associated biomarkers. Proteomic
… This review provides a progress update on urinary proteomics carried out over the past …

Etodolac improves collagen induced rheumatoid arthritis in rats by inhibiting synovial inflammation, fibrosis and hyperplasia

Q Feng, W Xia, S Wang, G Dai, W Jiao, N Guo, H Li… - Molecular …, 2021 - Springer
… In conclusion, using DIA and PRM proteomics to study the mechanism of synovial proliferation
provided more clues for the anti-synovial hyperplasia therapy. ETD can not only relieve …