Targeted single-cell RNA-seq identifies minority cell types of kidney distal nephron

L Chen, CL Chou, MA Knepper - Journal of the American Society …, 2021 - journals.lww.com
Background Proximal tubule cells dominate the kidney parenchyma numerically, although
less abundant cell types of the distal nephron have disproportionate roles in water and …

Single-cell RNA sequencing reveals the mesangial identity and species diversity of glomerular cell transcriptomes

B He, P Chen, S Zambrano, D Dabaghie, Y Hu… - Nature …, 2021 - nature.com
Molecular characterization of the individual cell types in human kidney as well as model
organisms are critical in defining organ function and understanding translational aspects of …

A single-cell transcriptome atlas of the mouse glomerulus

N Karaiskos, M Rahmatollahi… - Journal of the …, 2018 - journals.lww.com
Background Three different cell types constitute the glomerular filter: mesangial cells,
endothelial cells, and podocytes. However, to what extent cellular heterogeneity exists …

Single-cell transcriptome profiling of the kidney glomerulus identifies key cell types and reactions to injury

JJ Chung, L Goldstein, YJJ Chen, J Lee… - Journal of the …, 2020 - journals.lww.com
Background The glomerulus is a specialized capillary bed that is involved in urine
production and BP control. Glomerular injury is a major cause of CKD, which is epidemic …

Single-nucleus RNA sequencing identifies new classes of proximal tubular epithelial cells in kidney fibrosis

YA Lu, CT Liao, R Raybould, B Talabani… - Journal of the …, 2021 - journals.lww.com
Background Proximal tubular cells (PTCs) are the most abundant cell type in the kidney.
PTCs are central to normal kidney function and to regeneration versus organ fibrosis …

Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney

Y Muto, PC Wilson, N Ledru, H Wu, H Dimke… - Nature …, 2021 - nature.com
The integration of single cell transcriptome and chromatin accessibility datasets enables a
deeper understanding of cell heterogeneity. We performed single nucleus ATAC (snATAC …

Single-cell RNA sequencing of human kidney

J Liao, Z Yu, Y Chen, M Bao, C Zou, H Zhang, D Liu… - Scientific data, 2020 - nature.com
A comprehensive cellular anatomy of normal human kidney is crucial to address the cellular
origins of renal disease and renal cancer. Some kidney diseases may be cell type-specific …

Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-seq

L Chen, JW Lee, CL Chou, AV Nair… - Proceedings of the …, 2017 - National Acad Sciences
Prior RNA sequencing (RNA-seq) studies have identified complete transcriptomes for most
renal epithelial cell types. The exceptions are the cell types that make up the renal collecting …

Single-cell multi-omic and spatial profiling of human kidneys implicates the fibrotic microenvironment in kidney disease progression

A Abedini, J Levinsohn, KA Klötzer, B Dumoulin, Z Ma… - Nature Genetics, 2024 - nature.com
Kidneys are intricate three-dimensional structures in the body, yet the spatial and molecular
principles of kidney health and disease remain inadequately understood. We generated …

[HTML][HTML] Single-cell profiling reveals sex, lineage, and regional diversity in the mouse kidney

A Ransick, NO Lindström, J Liu, Q Zhu, JJ Guo… - Developmental cell, 2019 - cell.com
Chronic kidney disease affects 10% of the population with notable differences in ethnic and
sex-related susceptibility to kidney injury and disease. Kidney dysfunction leads to …