Splicing impact of deep exonic missense variants in CAPN3 explored systematically by minigene functional assay

E Dionnet, A Defour, N Da Silva, A Salvi… - Human …, 2020 - Wiley Online Library
Improving the accuracy of variant interpretation during diagnostic sequencing is a major
goal for genomic medicine. To explore an often‐overlooked splicing effect of missense …

Transcriptional explorations of CAPN3 identify novel splicing mutations, a large‐sized genomic deletion and evidence for messenger RNA decay

M Krahn, C Pécheux, F Chapon, C Béroud… - Clinical …, 2007 - Wiley Online Library
Mutations in the gene encoding calpain‐3 (CAPN3) cause autosomal recessive limb‐girdle
muscular dystrophy type 2A (LGMD2A) and idiopathic eosinophilic myositis. Accurate …

Identification of a novel deep intronic mutation in CAPN3 presenting a promising target for therapeutic splice modulation

Y Hu, P Mohassel, S Donkervoort… - Journal of …, 2019 - content.iospress.com
Calpainopathy, also known as limb girdle muscular dystrophy (LGMD) type 2A (LGMD2A) or
LGMD R1 Calpain3-related, is one of the most common genetically characterized forms of …

Transcriptional and translational effects of intronic CAPN3 gene mutations

AC Nascimbeni, M Fanin, E Tasca… - Human mutation, 2010 - Wiley Online Library
Variants of unknown significance in the CAPN3 gene constitute a significant challenge for
genetic counselling. Despite the frequency of intronic nucleotide changes in this gene (15 …

Overcoming the challenges associated with identification of deep intronic variants by whole genome sequencing

M Dirix, O Gribouval, C Arrondel, S Benjelloun… - Clinical …, 2023 - Wiley Online Library
Whole‐genome sequencing (WGS) now allows identification of multiple variants in non‐
coding regions. The large number of variants identified by WGS however complicates their …

CAPN5 genetic inactivation phenotype supports therapeutic inhibition trials

KJ Wert, SF Koch, G Velez, CW Hsu… - Human …, 2019 - Wiley Online Library
Small molecule pharmacological inhibition of dominant human genetic disease is a feasible
treatment that does not rely on the development of individual, patient‐specific gene therapy …

[HTML][HTML] SpliceAPP: an interactive web server to predict splicing errors arising from human mutations

AC Huang, JY Su, YJ Hung, HL Chiang, YT Chen… - BMC genomics, 2024 - Springer
Background Splicing variants are a major class of pathogenic mutations, with their severity
equivalent to nonsense mutations. However, redundant and degenerate splicing signals …

Computational prediction of human deep intronic variation

P Barbosa, R Savisaar, M Carmo-Fonseca… - …, 2023 - academic.oup.com
Background The adoption of whole-genome sequencing in genetic screens has facilitated
the detection of genetic variation in the intronic regions of genes, far from annotated splice …

Biallelic deletion in a minimal CAPN15 intron in siblings with a recognizable syndrome of congenital malformations and developmental delay

H Mor‐Shaked, S Salah, S Yanovsky‐Dagan… - Clinical …, 2021 - Wiley Online Library
Calpainopathies constitute a heterogeneous group of disorders resulting from deficiencies
in calpains, calcium‐specific proteases that modulate substrates by limited proteolysis …

[HTML][HTML] CAPN3 mRNA processing alteration caused by splicing mutation associated with novel genomic rearrangement of Alu elements

IH Salem, I Hsairi, N Mezghani, H Kenoun… - Journal of human …, 2012 - nature.com
Recessive mutations of CAPN3 gene are reported to be responsible for limb girdle muscular
dystrophy type 2A (LGMD2A). In all, 15–25% of intronic nucleotide changes identified in this …