How can natural language processing help model informed drug development?: a review

R Bhatnagar, S Sardar, M Beheshti, JT Podichetty - JAMIA open, 2022 - academic.oup.com
Objective To summarize applications of natural language processing (NLP) in model
informed drug development (MIDD) and identify potential areas of improvement. Materials …

Applications of advanced natural language processing for clinical pharmacology

JC Hsu, M Wu, C Kim, B Vora, YT Lien… - Clinical …, 2024 - Wiley Online Library
Natural language processing (NLP) is a branch of artificial intelligence, which combines
computational linguistics, machine learning, and deep learning models to process human …

Overview of the first natural language processing challenge for extracting medication, indication, and adverse drug events from electronic health record notes (MADE …

A Jagannatha, F Liu, W Liu, H Yu - Drug safety, 2019 - Springer
Introduction This work describes the Medication and Adverse Drug Events from Electronic
Health Records (MADE 1.0) corpus and provides an overview of the MADE 1.0 2018 …

A comparative study of pre-trained language models for named entity recognition in clinical trial eligibility criteria from multiple corpora

J Li, Q Wei, O Ghiasvand, M Chen, V Lobanov… - BMC medical informatics …, 2022 - Springer
Background Clinical trial protocols are the foundation for advancing medical sciences,
however, the extraction of accurate and meaningful information from the original clinical …

Detecting adverse drug events with rapidly trained classification models

AB Chapman, KS Peterson, PR Alba, SL DuVall… - Drug safety, 2019 - Springer
Introduction Identifying occurrences of medication side effects and adverse drug events
(ADEs) is an important and challenging task because they are frequently only mentioned in …

AI-based language models powering drug discovery and development

Z Liu, RA Roberts, M Lal-Nag, X Chen, R Huang… - Drug Discovery …, 2021 - Elsevier
The discovery and development of new medicines is expensive, time-consuming, and often
inefficient, with many failures along the way. Powered by artificial intelligence (AI), language …

[HTML][HTML] Using clinical natural language processing for health outcomes research: overview and actionable suggestions for future advances

S Velupillai, H Suominen, M Liakata, A Roberts… - Journal of biomedical …, 2018 - Elsevier
The importance of incorporating Natural Language Processing (NLP) methods in clinical
informatics research has been increasingly recognized over the past years, and has led to …

Improving RNN with attention and embedding for adverse drug reactions

C Pandey, Z Ibrahim, H Wu, E Iqbal… - Proceedings of the 2017 …, 2017 - dl.acm.org
Electronic Health Records (EHR) narratives are a rich source of information, embedding
high-resolution information of value to secondary research use. However, because the …

Review of natural language processing in pharmacology

D Trajanov, V Trajkovski, M Dimitrieva, J Dobreva… - Pharmacological …, 2023 - ASPET
Natural language processing (NLP) is an area of artificial intelligence that applies
information technologies to process the human language, understand it to a certain degree …

[HTML][HTML] Annotated dataset creation through large language models for non-english medical NLP

J Frei, F Kramer - Journal of Biomedical Informatics, 2023 - Elsevier
Obtaining text datasets with semantic annotations is an effortful process, yet crucial for
supervised training in natural language processing (NLP). In general, developing and …