Computational methods for human microbiome analysis

MJ Miossec, SL Valenzuela, KN Mendez… - Current Protocols in …, 2017 - Wiley Online Library
Current Protocols in Microbiology, 2017Wiley Online Library
As the field of microbiomics advances, the burden of computational work that scientists need
to perform in order to extract biological insight has grown accordingly. Likewise, while
human microbiome analyses are increasingly shifting toward a greater integration of various
high‐throughput data types, a core number of methods form the basis of nearly every study.
In this unit, we present step‐by‐step protocols for five core stages of human microbiome
research. The protocols presented in this unit provide a base case for human microbiome …
Abstract
As the field of microbiomics advances, the burden of computational work that scientists need to perform in order to extract biological insight has grown accordingly. Likewise, while human microbiome analyses are increasingly shifting toward a greater integration of various high‐throughput data types, a core number of methods form the basis of nearly every study. In this unit, we present step‐by‐step protocols for five core stages of human microbiome research. The protocols presented in this unit provide a base case for human microbiome analysis, complete with sufficient detail for researchers to tailor certain aspects of the protocols to the specificities of their data. © 2017 by John Wiley & Sons, Inc.
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