Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh)
High-density SNP arrays for genome-wide assessment of allelic variation have made high
resolution genetic characterization of crop germplasm feasible. A medium density array for
apple, the IRSC 8 K SNP array, has been successfully developed and used for screens of bi-
parental populations. However, the number of robust and well-distributed markers contained
on this array was not sufficient to perform genome-wide association analyses in wider
germplasm sets, or Pedigree-Based Analysis at high precision, because of rapid decay of …
resolution genetic characterization of crop germplasm feasible. A medium density array for
apple, the IRSC 8 K SNP array, has been successfully developed and used for screens of bi-
parental populations. However, the number of robust and well-distributed markers contained
on this array was not sufficient to perform genome-wide association analyses in wider
germplasm sets, or Pedigree-Based Analysis at high precision, because of rapid decay of …
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