Distinct gene-set burden patterns underlie common generalized and focal epilepsies

M Koko, R Krause, T Sander, DR Bobbili… - …, 2021 - thelancet.com
… was found for NAFE, and DEE featured a burden in both. Top-ranked susceptibility genes …
derived from generalized vs. focal epilepsies revealed specific enrichment patterns of URVs …

[PDF][PDF] Distinct gene-set burden patterns underlie common generalized and focal epilepsies

E Lander - 2021 - dspace.mit.edu
… specific gene-set associations in these three epilepsy forms. … In addition to exome-wide burden
testing (one gene-set of all … a) 34 sets based on gene expression patterns in the brain and …

Ultra-rare constrained missense variants in the epilepsies: Shared and specific enrichment patterns in neuronal gene-sets

M Koko, R Krause, T Sander, DR Bobbili, M Nothnagel… - bioRxiv, 2021 - biorxiv.org
… Conclusions Using exome-based gene-set burden analysis, we … factors underlying the
complex genetic architecture of these … three different subtypes of common generalized and focal

GWAS meta-analysis of over 29,000 people with epilepsy identifies 26 risk loci and subtype-specific genetic architecture

Nature genetics, 2023 - nature.com
… We implicate 29 likely causal genes underlying these 26 loci. SNP-based heritability …
performed a gene-set analysis using lists of expert-curated gene sets involving 18 different synaptic …

[HTML][HTML] Shared and distinct ultra-rare genetic risk for diverse epilepsies: A whole-exome sequencing study of 54,423 individuals across multiple genetic ancestries

E Collaborative, S Chen, BM Neale, SF Berkovic - medRxiv, 2023 - ncbi.nlm.nih.gov
common forms of epilepsies – genetic generalized epilepsy (… with epilepsy, we performed
burden tests at a gene-set level, … can further elucidate the underlying molecular mechanisms, …

Exome sequencing of 20,979 individuals with epilepsy reveals shared and distinct ultra-rare genetic risk across disorder subtypes

Nature neuroscience, 2024 - nature.com
… encephalopathies and generalized and focal epilepsies, … with epilepsy, we performed burden
tests at a gene set level. … genetic risk underlying epilepsy across different genetic ancestries…

Genome-wide meta-analysis of over 29,000 people with epilepsy reveals 26 loci and subtype-specific genetic architecture

… Against Epilepsy Consortium on Complex Epilepsies… - MedRxiv, 2022 - medrxiv.org
… We implicate 29 likely causal genes underlying these 26 loci. SNP-based heritability …
performed a gene-set analysis using lists of expert-curated gene-sets involving 18 different synaptic …

Ultra-rare constrained missense variants in the epilepsies: Shared and specific enrichment patterns in neuronal gene-sets 2021.04. 18.440264

M Koko, R Krause, T Sander, DR Bobbili, M Nothnagel… - 2021 - orbilu.uni.lu
… Performing three separate analyses for the three epilepsy phenotypes, with independent …
Gene-set burden analysis: We examined the burden of qualifying ultra-rare variants (QVs) …

Dissecting the genetic basis of comorbid epilepsy phenotypes in neurodevelopmental disorders

J Chow, M Jensen, H Amini, F Hormozdiari, O Penn… - Genome medicine, 2019 - Springer
… that underlie the epilepsy phenotype and display distinct … ), revealing increased de novo
mutation burden in cases relative to … Modules seeded with genes from class 1 gene set contain a …

[HTML][HTML] Unraveling the shared genetics of common epilepsies and general cognitive ability

N Karadag, E Hagen, AA Shadrin… - … Journal of Epilepsy, 2024 - Elsevier
… that genetic factors can underlie this relationship. … epilepsy’, and 2.3k variants with both
JME and CAE. Using conjFDR, we identified 66 distinct loci shared between COG and epilepsies