The last decades are witnessing a growing concern about environmental impacts due to human activities. Within this context, studies are being developed to understand the impacts on the diversity of natural elements. This article presents a method to identify geomorphological diversity hotspots at a detailed scale through a quantitative approach, which was applied to a protected coastal area in Rio de Janeiro State, SE Brazil. These hotspots are understood as areas that present significant diversity of landforms and, at the same time, risks of degradation, which justifies the definition of priorities for the territorial management aiming at nature conservation purposes. The results allowed the identification of five hotspots, showing that, even though the area is legally protected, it still faces problems related to threats caused by human activities. Therefore, specific problems of territorial management in a protected area were identified through the creation of a product that indicates the priority areas for conservation in a different way and can be easily applied as a tool to support managers. Furthermore, several subproducts were created in the process, which also can be used for other purposes.