… independent component analysis (ICA) to bladder cancer transcriptome data sets and interpreted
the components … of the components retrieved from our reference bladder tumor set (CIT …

… We show here that by applying ICA to bladder cancer transcriptome data sets, exploiting …
applied to multiple cancer types, it is possible to obtain insights into bladder carcinogenesis. …

… majority of bladder tumours at … to uncovering novel molecular biomarkers from bulk sequencing
data that have an impact on clinical outcomes by analysing the data at the transcriptome …

… The molecular landscape in non-muscle-invasive bladder cancer (NMIBC) is characterized
by large … At the transcriptomics level, we identified four main classes of NMIBC with the …

… bulk transcriptome, which allows studying the properties of tumor … of bladder cancer,
decomposition of bulk tumors into 20 … of independent component analysis to tumor transcriptomes …

… Employing phylogenetic analysis, we uncovered microbial species within the bladder
TME of one … NanoString GeoMx human whole transcriptome atlas32 to differentiate tumor-specific …

… landscape of recurrent BLCA are currently lacking. We sought to analyse whole-transcriptome
data … Analysing the integrated data using principal component analysis (PCA) reduced the …

… the genome-wide transcriptome, enhancer landscape, and … and basal subtypes of bladder
cancer. Furthermore, we report … C in both bladder cancer cell lines and primary patient tumors. …

… bladder cancer patients by exploiting transcriptome analysis, … principal components analysis
(PCA) of the transcriptome data … genes may refine the molecular landscape, contributing to a …

… modules for such analysis. We apply independent component analysis to the large collection
of … based on the human transcriptome (20,089 genes), and identified a set of 139 functional …