[HTML][HTML] KEGGscape: a Cytoscape app for pathway data integration
… KEGGscape a pathway data integration and visualization app for Cytoscape ( http://apps.cytoscape.org/apps…
The goal of our new Cytoscape app, KEGGscape, is to bridge the flexibility …
The goal of our new Cytoscape app, KEGGscape, is to bridge the flexibility …
KEGGscape: a Cytoscape app for pathway data integration
N Kozo, O Keiichiro, K Shigehiko… - …, 2014 - search.proquest.com
… , we present KEGGscape a pathway data integration and visualization app for Cytoscape
( … The goal of our new Cytoscape app, KEGGscape, is to bridge the flexibility of fully-featured …
( … The goal of our new Cytoscape app, KEGGscape, is to bridge the flexibility of fully-featured …
Bringing data from curated pathway resources to Cytoscape with OmniPath
… We present here the OmniPath App, a Cytoscape plugin to flexibly import data from OmniPath
via a simple and intuitive interface. Thus, it makes possible to directly access the large …
via a simple and intuitive interface. Thus, it makes possible to directly access the large …
kpath: integration of metabolic pathway linked data
I Navas-Delgado, MJ García-Godoy… - Database, 2015 - academic.oup.com
… Cytoscape ( 29 ) is a tool that represents biological pathways and covers a wide set of features
such as pathway editing, exporting of pathway … how data integration based on linked data …
such as pathway editing, exporting of pathway … how data integration based on linked data …
[HTML][HTML] CyKEGGParser: tailoring KEGG pathways to fit into systems biology analysis workflows
L Nersisyan, R Samsonyan, A Arakelyan - F1000Research, 2014 - ncbi.nlm.nih.gov
… KEGGscape ( http://apps.cytoscape.org/apps/keggscape) for KEGG pathways visualization
and data integration… describe CyKEGGParser app for Cytoscape 3 for KEGG pathway retrieval…
and data integration… describe CyKEGGParser app for Cytoscape 3 for KEGG pathway retrieval…
[HTML][HTML] Cytoscape tools for the web age: D3. js and Cytoscape. js exporters
… app called KEGGScape ( http://apps.cytoscape.org/apps/keggscape). The advantage of this
… use the large collection of existing Cytoscape apps for data integration and analysis, and the …
… use the large collection of existing Cytoscape apps for data integration and analysis, and the …
Development of network analysis and visualization system for KEGG pathways
D Seo, MH Lee, SJ Yu - Symmetry, 2015 - mdpi.com
… Cytoscape is an open source bioinformatics software platform for visualizing molecular …
The multiple pathways merge methodology used in our system is based on KEGGscape [18,…
The multiple pathways merge methodology used in our system is based on KEGGscape [18,…
Tools for visualization and analysis of molecular networks, pathways, and-omics data
JM Villaveces, P Koti… - Advances and applications …, 2015 - Taylor & Francis
… KEGGScape Citation46 are plugins provided by KEGG for pathway import and visualization
in Cytoscape … However, data integration is still challenging. For instance, mapping between …
in Cytoscape … However, data integration is still challenging. For instance, mapping between …
Integrated network analysis and effective tools in plant systems biology
A Fukushima, S Kanaya, K Nishida - Frontiers in plant science, 2014 - frontiersin.org
… the database client and facilitate data integration (Table 1). … data we used Cytoscape with
its app/plug-in KEGGscape (http:… KEGGscape supports KEGG pathway files in KGML format …
its app/plug-in KEGGscape (http:… KEGGscape supports KEGG pathway files in KGML format …