Kablammo: an interactive, web-based BLAST results visualizer
JA Wintersinger, JD Wasmuth - Bioinformatics, 2015 - academic.oup.com
Bioinformatics, 2015•academic.oup.com
Motivation: Kablammo is a web-based application that produces interactive, vector-based
visualizations of sequence alignments generated by BLAST. These visualizations can
illustrate many features, including shared protein domains, chromosome structural
modifications and genome misassembly. Availability and implementation: Kablammo can be
used at http://kablammo. wasmuthlab. org. For a local installation, the source code and
instructions are available under the MIT license at http://github. com/jwintersinger/kablammo …
visualizations of sequence alignments generated by BLAST. These visualizations can
illustrate many features, including shared protein domains, chromosome structural
modifications and genome misassembly. Availability and implementation: Kablammo can be
used at http://kablammo. wasmuthlab. org. For a local installation, the source code and
instructions are available under the MIT license at http://github. com/jwintersinger/kablammo …
Abstract
Motivation: Kablammo is a web-based application that produces interactive, vector-based visualizations of sequence alignments generated by BLAST. These visualizations can illustrate many features, including shared protein domains, chromosome structural modifications and genome misassembly.
Availability and implementation: Kablammo can be used at http://kablammo.wasmuthlab.org. For a local installation, the source code and instructions are available under the MIT license at http://github.com/jwintersinger/kablammo.
Contact: jeff@wintersinger.org
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