Noncoding and coding transcriptome analysis reveals the regulation roles of long noncoding RNAs in fruit development of hot pepper (Capsicum annuum L.)

L Ou, Z Liu, Z Zhang, G Wei, Y Zhang, L Kang… - Plant Growth …, 2017 - Springer
… The hot pepper reference genome and annotation used in this study were downloaded (http:…
of long non-coding RNAs and circle RNAs in hot pepper. CPC, coding potential calculator …

[HTML][HTML] Development and characterization of non-coding RNA based simple sequence repeat markers in Capsicum species

V Jaiswal, A Rawoof, M Dubey, SS Chhapekar… - Genomics, 2020 - Elsevier
non-coding RNAs are widely known as key players of gene … important abundantly found
non-coding RNAs regulating growth … The miRNAs, are reported to mainly down regulate gene

Transcriptomic profile analysis of non-coding RNAs involved in Capsicum chinense Jacq. fruit ripening

S Yang, T Yang, Y Tang, P Aisimutuola, G Zhang… - Scientia …, 2020 - Elsevier
… ncRNAs in Capsicum chinense Jacq… gene regulation in plants. Overall, the findings from
this study provide knowledge on ncRNAs functional and regulation dynamism during Capsicum

Analysis of the coding and non-coding RNA transcriptomes in response to bell pepper chilling

J Zuo, Y Wang, B Zhu, Y Luo, Q Wang… - International journal of …, 2018 - mdpi.com
Increasing evidence suggests that long non-coding RNAs (lncRNAs), circular RNAs (circRNAs),
and microRNAs (miRNAs) have roles during biotic and abiotic stress, though their exact …

Noncoding RNAs in Capsicum Genome

I Ahmad, M Nitin, A Rawoof, M Dubey… - … Capsicum Genome, 2019 - Springer
… Therefore, in gene regulatory network, noncoding RNAs are considered as … on noncoding
RNAs especially small noncoding RNAs are reported mostly in Tomato. However, in Capsicum

Genome wide identification and characterization of abiotic stress responsive lncRNAs in Capsicum annuum

PM Baruah, DB Krishnatreya, KS Bordoloi… - Plant Physiology and …, 2021 - Elsevier
… Long non-coding RNAs (lncRNAs) are a type of non-coding transcripts having length of …
In the present study, 12807 lncRNAs were identified in Capsicum annuum tissues exposed to …

Integrated Analysis of mRNA and Non-coding RNA Transcriptome in Pepper (Capsicum chinense) Hybrid at Seedling and Flowering Stages

H Shu, H Zhou, H Mu, S Wu, Y Jiang, Z Yang… - Frontiers in …, 2021 - frontiersin.org
gene expression at the seedling and flowering stages between the hybrid and its parents in
Capsicum … Kyoto Encyclopedia of Genes and Genomes analysis showed that nine members …

Network analysis of noncoding RNAs in pepper provides insights into fruit ripening control

J Zuo, Y Wang, B Zhu, Y Luo, Q Wang, L Gao - Scientific Reports, 2019 - nature.com
… regulation of bell pepper fruit ripening by noncoding RNAs (… ), 125 circular RNAs (circRNAs),
366 long noncoding RNAs (… or DNA in either cis or trans configurations, regulating gene

Systematic identification and characterization of long non-coding RNAs involved in cytoplasmic male sterility in pepper (Capsicum annuum L.)

J Lv, Z Liu, B Yang, M Deng, J Wang, Y Liu… - Plant growth …, 2020 - Springer
… long antisense intragenic RNA) and COLDAIR (cold assisted intronic non-coding RNA),
can be epigenetically induced after vernalization treatment to repress the gene expression of …

Genome-wide identification and characterization of tissue-specific non-coding RNAs in black pepper (Piper nigrum L.)

B Kumar, B Saha, S Jaiswal, UB Angadi… - Frontiers in Plant …, 2023 - frontiersin.org
… Finally, we identified 6406 novel black pepper long non-coding RNAs in black pepper, out
of which 1115, 2621, 2727, 828, 1214, and 1003 were expressed in flower, fruit, leaf, panicle, …