Protein side-chain dynamics as observed by solution-and solid-state NMR spectroscopy: a similarity revealed

V Agarwal, Y Xue, B Reif… - Journal of the American …, 2008 - ACS Publications
In this paper, we seek to compare the internal dynamics of a small globular protein, SH3
domain from α-spectrin, in solution and in a crystalline state. The comparison involves side-
chain methyl 13C R 1 relaxation rates that are highly sensitive to local dynamics in the
vicinity of the methyl site. To conduct the relaxation measurements, protein samples have
been prepared using specially labeled α-ketoisovalerate precursors, resulting in selective
incorporation of the 1H− 13C spin pair in one or both methyl groups of the valine and …

Protein Side-Chain Dynamics Observed by Solution- and Solid-State NMR:  Comparative Analysis of Methyl 2H Relaxation Data

B Reif, Y Xue, V Agarwal, MS Pavlova… - Journal of the …, 2006 - ACS Publications
Rapid advances in solid-state MAS NMR made it possible to probe protein dynamics on a
per-residue basis, similar to solution experiments. In this work we compare methyl 2H
relaxation rates measured in the solid and liquid samples of α-spectrin SH3 domain. The
solution data are treated using a model-free approach to separate the contributions from the
overall molecular tumbling and fast internal motion. The latter part forms the basis for
comparison with the solid-state data. Although the accuracy of solid-state measurements is …
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