Using heat as a tracer allows for estimation of ground water recharge rates based on subsurface temperature measurements. While possible in theory, it may be difficult in practice to discriminate the effects of climate from the effects of ground water advection. This study uses synthetic simulations to determine the influence of variability of ground surface temperature (GST) on the ability to estimate vertical specific discharge from temperature profiles. Results suggest that in cases where temperature measurements are sufficiently deep and specific discharge is sufficiently high, estimates of specific discharges will be reasonably accurate. Increasing the number of times temperatures are measured, or producing models that incorporate variations in GST, will increase the reliability of any studies using temperatures to estimate specific discharge. Furthermore, inversions of temperature measurements should be combined with other methods of estimating recharge rates to improve the reliability of recharge estimates.