The genome of a songbird

WC Warren, DF Clayton, H Ellegren, AP Arnold… - Nature, 2010 - nature.com
… ), which is a songbird belonging to the large avian … the songbird lineage of genes that are
regulated during song experience. These results indicate an active involvement of the genome

Comparative genomics reveals molecular features unique to the songbird lineage

M Wirthlin, PV Lovell, ED Jarvis, CV Mello - Bmc Genomics, 2014 - Springer
… to unannotated scaffolds, putative songbird novel gene sets … of identifying songbird-specific
genes: two additional songbirds, … be orthologous between songbirds and non-songbirds, and …

Songbird genomics: methods, mechanisms, opportunities, and pitfalls

DF Clayton - Annals of the New York Academy of Sciences, 2004 - Wiley Online Library
songbirdssongbird genome and how songbird brain gene expression has been measured
in past studies. Four key problems in songbird biology are then considered from a genomics

Discovery and population genomics of structural variation in a songbird genus

MH Weissensteiner, I Bunikis, A Catalán… - Nature …, 2020 - nature.com
Structural variation (SV) constitutes an important type of genetic mutations providing the raw
material for evolution. Here, we uncover the genome-wide spectrum of intra- and …

[HTML][HTML] Integrating genomes, brain and behavior in the study of songbirds

DF Clayton, CN Balakrishnan, SE London - Current Biology, 2009 - cell.com
songbird biology such as the neural control of singing, the complex social lives of songbirds,
and the ability of songbirds … zebra finch genome sequence may have transformative impact. …

Transcriptome Analysis of a North American Songbird, Melospiza melodia

A Srivastava, K Winker, TI Shaw, KL Jones… - DNA …, 2012 - academic.oup.com
… This study provides new insight into songbird transcriptomes, and candidate markers identified
here may help research in songbirds (oscine Passeriformes), a frequently studied group. …

A role for migration‐linked genes and genomic islands in divergence of a songbird

K Ruegg, EC Anderson, J Boone, J Pouls… - Molecular …, 2014 - Wiley Online Library
… differentiation in this migratory songbird. Our analyses revealed … in reproductive isolation in
songbirds showed that genes linked … role in divergence in migratory songbirds, but we find no …

CNVs are associated with genomic architecture in a songbird

VH da Silva, VN Laine, M Bosse, K Oers, B Dibbits… - BMC genomics, 2018 - Springer
Background Understanding variation in genome structure is essential to understand phenotypic
differences within populations and the evolutionary history of species. A promising form …

De novo transcriptome sequencing in a songbird, the dark-eyed junco (Junco hyemalis): genomic tools for an ecological model system

MP Peterson, DJ Whittaker, S Ambreth… - BMC genomics, 2012 - Springer
… We have successfully sequenced a transcriptome of an ecological model songbird, the
dark-… a valuable resource for the study of many songbird species. Based on the identification of …

Brain transcriptome of the violet-eared waxbill Uraeginthus granatina and recent evolution in the songbird genome

CN Balakrishnan, C Chapus, MS Brewer… - Open …, 2013 - royalsocietypublishing.org
Songbirds are important models for the study of social behaviour and communication. To
complement the recent genome … transcriptome of a closely related songbird species, the violet-…