… sequenceanalysis to understand their … , we analyze the tools associated with the multiple steps in the genome assembly pipeline using nanoporesequence data in terms of accuracy, …
… due to common concerns around sequencingaccuracy. To address this… in ONT sequencing reads, highly accurate consensus-level … the capacity of nanoporesequencing to identify intra-…
… tools to process the MinION sequencing data and to improve accuracy have been developed, tested… approaches to improve the accuracy of nanoporesequencing data by focusing on (i) …
Z Gu, YL Ying, C Cao, P He, YT Long - Analytical chemistry, 2015 - ACS Publications
… Here, we propose an automatic and accuratenanopore data process that includes … accurately measure the dwell time. We demonstrated that the DBC method improves the accuracy of …
… truth dataset for model training and basecaller accuracyanalysis. By removing short (1 Kbp) … genome is not used during basecaller training or accuracyanalysis we don’t report on its …
… Basecalling accuracy can be assessed at the read level (read accuracy) or in terms … accuracy of the consensus sequence (consensus accuracy). Read accuracy measures the sequence …
Y Chen, F Nie, SQ Xie, YF Zheng, Q Dai, T Bray… - Nature …, 2021 - nature.com
… Next, we analyzedsequencing errors in each nanopore read. We first aligned each read onto the reference genomes. We partitioned each read into 500-bp long subsequences and …
… of short and long-read sequencing methods that require RNA … We developed NanoCount for fast, accurate transcript … cells, we show that DRS accurately quantifies RNA expression and …
… We present the first comprehensive evaluation of sequencingaccuracy and characterisation … that for sequencing kits SQK-RNA001 and SQK-RNA002, the median read accuracy ranged …