Population genomics in the arboviral vector Aedes aegypti reveals the genomic architecture and evolution of endogenous viral elements

CM Crava, FS Varghese, E Pischedda… - Molecular …, 2021 - Wiley Online Library
… identify the genome integration site by remapping the flanking regions to the A. aegypti genome,
we … aegypti, that had been sequenced with linked-read (10×) sequencing that generated …

Identifying genomic changes associated with insecticide resistance in the dengue mosquito Aedes aegypti by deep targeted sequencing

F Faucon, I Dusfour, T Gaude, V Navratil… - Genome …, 2015 - genome.cshlp.org
… allowed screening for genomic variants across whole genomes. However, such an approach
required a huge amount of sequences to reach the minimum genome coverage necessary …

Genome-wide divergence among invasive populations of Aedes aegypti in California

Y Lee, H Schmidt, TC Collier, WR Conner… - BMC genomics, 2019 - Springer
aegypti into California. This is the first paper that utilizes the whole genome sequences of
Aedes aegyptiVariants in the mitochondrial genome were called with Freebayes as described …

Permethrin resistance in Aedes aegypti: Genomic variants that confer knockdown resistance, recovery, and death

K Saavedra-Rodriguez, CL Campbell, S Lozano… - PLoS …, 2021 - journals.plos.org
genome of resistant (kdr), recovered, and dead mosquitoes after insecticide exposure. Our
aim is to identify genomic variantsgenomic markers associated with resistance in the Aedes

Insecticide-Driven Patterns of Genetic Variation in the Dengue Vector Aedes aegypti in Martinique Island

S Marcombe, M Paris, C Paupy, C Bringuier… - PLoS …, 2013 - journals.plos.org
… The analyse of both neutral and adaptive genetic variation using genome-wide distributed
molecular markers represents a powerful tool to better understand the genetic structure of …

Probing functional polymorphisms in the dengue vector, Aedes aegypti

M Bonizzoni, M Britton, O Marinotti, WA Dunn, J Fass… - BMC genomics, 2013 - Springer
… The study of genetic variation requires molecular markers [4]. Aedes aegypti has a low
abundance of microsatellite markers and limited (less than 200) known restriction fragments …

The genomic signal of local environmental adaptation in Aedes aegypti mosquitoes

KL Bennett, WO McMillan… - Evolutionary Applications, 2021 - Wiley Online Library
… Temperature and vegetation were important predictors of adaptive genomic variation in Ae.
… We first investigate how genomic variation in Ae. aegypti is distributed across Panama. We …

The diversity, structure, and function of heritable adaptive immunity sequences in the Aedes aegypti genome

ZJ Whitfield, PT Dolan, M Kunitomi, M Tassetto… - Current Biology, 2017 - cell.com
… De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length …
source of genomic variation that drives evolution by modifying gene regulation and genome

Aedes aegypti genomics

DW Severson, DL Knudson, MB Soares… - Insect biochemistry and …, 2004 - Elsevier
aegypti genome and those that are present are often imbedded in repetitive elements that
prevent their utilization as single copy markers. Nonetheless, a 205 cM composite linkage …

Population genomics reveals that an anthropophilic population of Aedes aegypti mosquitoes in West Africa recently gave rise to American and Asian populations of …

JE Crawford, JM Alves, WJ Palmer, JP Day, M Sylla… - BMC biology, 2017 - Springer
… across the genome. Although there appears to be some variation across chromosomes, we
found no evidence that the patterns we see are driven by a single region of the genome or a …