Real-time DNA barcoding in a rainforest using nanopore sequencing: opportunities for rapid biodiversity assessments and local capacity building
A Pomerantz, N Peñafiel, A Arteaga… - …, 2018 - academic.oup.com
… We demonstrate that nanopore sequencing can be implemented … allowed us to generate
sequence information at the Universidad … sequencing, and with further multiplexing of samples, …
sequence information at the Universidad … sequencing, and with further multiplexing of samples, …
Nanopore sequencing of long ribosomal DNA amplicons enables portable and simple biodiversity assessments with high phylogenetic resolution across broad …
H Krehenwinkel, A Pomerantz, JB Henderson… - …, 2019 - academic.oup.com
… explore the feasibility of Nanopore sequencing of long rDNA amplicons … Nanopore consensus
sequences and introduce MiniBar, a new software to demultiplex dual indexed Nanopore …
sequences and introduce MiniBar, a new software to demultiplex dual indexed Nanopore …
Genetic biomonitoring and biodiversity assessment using portable sequencing technologies: current uses and future directions
… application of nanopore sequencing for biodiversity explorations, with … nanopore sequencing
for biodiversity assessments. We specifically focus on ONT’s portable MinION sequencing …
for biodiversity assessments. We specifically focus on ONT’s portable MinION sequencing …
A rapid and accurate MinION-based workflow for tracking species biodiversity in the field
… sequencing. Even so, new ONT chemistries and software updates have greatly improved the
throughput and 1D-read accuracy of nanopore sequencing in … of nanopore sequencing, the …
throughput and 1D-read accuracy of nanopore sequencing in … of nanopore sequencing, the …
[HTML][HTML] Comparative analysis of bottom trawl and Nanopore sequencing in fish biodiversity assessment: the Sylt Outer Reef example
… eDNA metabarcoding using MinION sequencer (Nanopore Technology) against traditional
… detection and diversity assessment. By providing a comprehensive assessment of fish …
… detection and diversity assessment. By providing a comprehensive assessment of fish …
On site DNA barcoding by nanopore sequencing
M Menegon, C Cantaloni, A Rodriguez-Prieto… - PLoS …, 2017 - journals.plos.org
… on biodiversity. In addition, if the quality of data generated with portable sequencing technologies
… , they could have an impact on biodiversity assessment by fastening the pace at which …
… , they could have an impact on biodiversity assessment by fastening the pace at which …
Third generation sequencing: technology and its potential impact on evolutionary biodiversity research
C Bleidorn - Systematics and biodiversity, 2016 - Taylor & Francis
… advancements of third generation sequencing instruments, thereby covering nanopore …
The first MinIONs were distributed to selected laboratories for beta-testing in early 2014. The …
The first MinIONs were distributed to selected laboratories for beta-testing in early 2014. The …
Real-time DNA barcoding in a remote rainforest using nanopore sequencing
… may have limited funds for biodiversity research projects and (b… We assessed the feasibility
for in situ genetic sequencing of … and biodiversity science, portable nanopore sequencing can …
for in situ genetic sequencing of … and biodiversity science, portable nanopore sequencing can …
Utilisation of Oxford Nanopore sequencing to generate six complete gastropod mitochondrial genomes as part of a biodiversity curriculum
… The primary purpose of this study was to assess whether ONT can be used in a biodiversity
… 4) and implies a re-assessment using different sequencing technologies may be useful. …
… 4) and implies a re-assessment using different sequencing technologies may be useful. …
DNA Barcoding for Species Identification of Moss-Dwelling Invertebrates: Performance of Nanopore Sequencing and Coverage in Reference Database
… with nanopore sequencing for biodiversity assessment and … assessed (1) whether the
quality of DNA barcodes differed between nanopore sequencing (using both Oxford Nanopore …
quality of DNA barcodes differed between nanopore sequencing (using both Oxford Nanopore …
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