Integrating DNA methylation measures of biological aging into social determinants of health research

L Raffington, DW Belsky - Current Environmental Health Reports, 2022 - Springer
… original epigenetic clocks developed to predict chronological age. These new measures
show consistent evidence of more advanced and faster biological aging in people exposed to …

Using computational models to study aging

M Mc Auley, K Mooney - Conn's handbook of models for human aging, 2018 - Elsevier
… and health span, the burgeoning field of epigenetics has shed light on the integrated nature
… methylation changes have been compared to an “epigenetic clock,” the time of which is set …

Biological stability of DNA methylation measurements over varying intervals of time and in the presence of acute stress

AT Apsley, Q Ye, L Etzel, S Wolf, WJ Hastings… - Epigenetics, 2023 - Taylor & Francis
… DNAm probes used in common epigenetic clocks and immune cell proportion estimators
had varying distributions in each test-retest scenario. Notably, the robustness of the probes …

A methylation clock model of mild SARS‐CoV‐2 infection provides insight into immune dysregulation

W Mao, CM Miller, VD Nair, Y Ge… - Molecular Systems …, 2023 - embopress.org
… that is not accounted for in computational cell-type deconvolution … epigenetic state we identify
is distinct from trained immunity. … Together, these observations suggest that the epigenetic

Epigenetic Tracking: Towards a Project for an Artificial Biology

A Fontana - arXiv preprint arXiv:0904.4643, 2009 - arxiv.org
… All targets are 100x100 multi-cellular arrays: the limited computational resources available
… -clock theory argues that ageing results from a preprogrammed sequence, as in a clock, built …

Microscopic Imaging of Epigenetic Age

D Rodriguez, M Alvarez-Kuglen, H Qin, L Fiengo… - bioRxiv, 2022 - biorxiv.org
epigenetic age (ImAge), a fundamentally different approach to studying aging compared to
DNAm clocks… the same coefficient 𝛼 i Such computations enabled us to identify key metabolic …

A CellAge epigenetic clock for expedited discovery of anti-ageing compounds in vitro

C Lujan, EJ Tyler, AP Webster, ER Stead, VEM Miguel… - bioRxiv, 2019 - biorxiv.org
clock is ±2.5 years (maximal correlation coefficient 0,98) (Horvath et al. 2018). Epigenetic
clocks … diploid human genome, coupled with computational algorithms, is sufficient to provide …

[HTML][HTML] Mother's childhood adversity is associated with accelerated epigenetic aging in pregnancy and in male newborns

CK Dye, H Wu, C Monk, DW Belsky, D Alschuler, S Lee… - BioRxiv, 2023 - ncbi.nlm.nih.gov
… across epigenetic clocks, we employed a PC-based approach to these epigenetic clocks
recently described by Higgens-Chen et al. as a way to increase reliability of epigenetic clock

A phylogenetic, ontogenetic, and epigenetic view of bio-inspired hardware systems

M Sipper, E Sanchez, D Mange… - … Computation, 1997 - ieeexplore.ieee.org
… evolution of the genetic programs within individuals and species, the ontogenetic level
concerns the developmental process of a single multicellular organism, and the epigenetic level …

[图书][B] Design and Implementation of a Web Interface with Epigenetic Pacemaker Model (EPM) for Analyzing Epigenetic Data

W Zhang - 2022 - search.proquest.com
… analyze their epigenetic data, at the same time conserving the accuracy in the epigenetic data
prediction. … Since the EPM model is computationally heavy, selecting informative loci in the …