DK Shoemark, CK Colenso, C Toelzer… - Angewandte …, 2021 - Wiley Online Library
… BUDE docks linoleate into the lockedSARS-CoV-2 spike trimer in a conformation consistent with cryo-EM structures. A) Cryo-EM structure of the LA − -bound spike trimer in the …
D Asarnow, B Wang, WH Lee, Y Hu, CW Huang… - Cell, 2021 - cell.com
… ACE2 binding but also alter the Spike protein conformational cycle triggered by ACE2 binding. We show that stabilization of different Spike conformations leads to modulation of Spike-…
VL Terse, S Gosavi - Biophysical Journal, 2021 - cell.com
… pro (M pro C) locks M pro into a hyperactive … conformations by mutations or ligand binding. Finally, because all residues in the tryptophan loop are identical in SARS-CoV and SARS-CoV…
We modeled 3D structures of all SARS‐CoV‐2 proteins, generating 2,060 models that span 69% of the viral proteome and provide details not available elsewhere. We found that 6% of …
S Borkotoky, D Dey, M Banerjee - Journal of Chemical Information …, 2021 - ACS Publications
… Taken together, this shows that of all of the conformations tested, only the trimeric form of SARS-CoV-2 FP-L is capable of triggering the formation of a fusion bridge between dual …
… highly dynamic loop in the SARS-CoV-2 spike protein RBM from residue 475 to 485. It is predicted by induced fit theory 39 that the binding event induces a conformational change at the …
DC Dinesh, D Chalupska, J Silhan, E Koutna… - PLoS …, 2020 - journals.plos.org
… structures it is locked in one place by crystal lattice contacts. … a set of water-refined conformations for the protein:dsRNA … it was selected as a representative conformation for the …
L Rutten, M Swart, A Koornneef, P Bouchier… - Scientific Reports, 2024 - nature.com
… In addition, further stabilization of the prefusion conformation of spike might improve … (S-locked), in which the receptor binding domains (RBDs) were locked in a closed conformation and …
AC Hunt, JB Case, YJ Park, L Cao, K Wu… - Science translational …, 2022 - science.org
… syndrome coronavirus 2 (SARS-CoV-2) continue to arise and prolong the coronavirus … containing multiple computationally designed miniprotein inhibitors of SARS-CoV-2. We found the …