Landscape analysis of escape variants identifies SARS-CoV-2 spike mutations that attenuate monoclonal and serum antibody neutralization

Z Liu, LA VanBlargan, LM Bloyet, PW Rothlauf… - BioRxiv, 2020 - biorxiv.org
… the immune-selected mutational landscape in S protein, we used a VSV-eGFP-SARS-CoV-2-S …
-mediated mutational landscape in S with sequence variation in circulating SARS-CoV-2, …

[HTML][HTML] Global landscape of SARS-CoV-2 genomic surveillance and data sharing

Z Chen, AS Azman, X Chen, J Zou, Y Tian, R Sun… - Nature …, 2022 - nature.com
… our understanding of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)
variants. We performed a global landscape analysis on SARS-CoV-2 genomic surveillance and …

[HTML][HTML] Global landscape of SARS-CoV-2 mutations and conserved regions

MH Abbasian, M Mahmanzar, K Rahimian… - Journal of Translational …, 2023 - Springer
… In our Analysis, different SARS-CoV-2 proteins harbor the maximum rate of mutations,
including N, nsp3, S, nsp4, nsp12, and M. The rate of four mutations and above is depicted in Fig. …

Evolution, mode of transmission, and mutational landscape of newly emerging SARS-CoV-2 variants

C Chakraborty, AR Sharma, M Bhattacharya… - Mbio, 2021 - Am Soc Microbiol
… Some significant mutations (E484K, K417T/N, N501Y, and D614G) found in emerging
variants and their structural landscapes. We performed structural landscape analysis of some …

[HTML][HTML] Functional landscape of SARS-CoV-2 cellular restriction

L Martin-Sancho, MK Lewinski, L Pache, CA Stoneham… - Molecular cell, 2021 - cell.com
… -2) infection has been implicated as a determinant of severe coronavirus disease 2019 (…
IFN control of SARS-CoV-2 infection, we conducted a large-scale gain-of-function analysis that …

[HTML][HTML] The SARS-CoV-2 subgenome landscape and its novel regulatory features

D Wang, A Jiang, J Feng, G Li, D Guo, M Sajid, K Wu… - Molecular cell, 2021 - cell.com
landscapes of SARS-CoV-2 subgenomes. Interestingly, template switching could occur
in a bidirectional manner, with diverse SARS-CoV-2 … the subgenome landscape of SARS-CoV-2 …

[HTML][HTML] The mutational landscape of SARS-CoV-2

B Saldivar-Espinoza, P Garcia-Segura… - International Journal of …, 2023 - mdpi.com
analyze the mutational landscape of SARS-CoV-2 using data from more than 5 million
SARS-CoV-… , and in particular, we analyze their distribution among SARS-CoV-2 genes, the most …

[HTML][HTML] Multiomics: unraveling the panoramic landscapes of SARS-CoV-2 infection

X Wang, G Xu, X Liu, Y Liu, S Zhang… - Cellular & Molecular …, 2021 - nature.com
… and dynamic subgenomic landscapes of SARS-CoV-2 [13]. N6… identified on the genomic
RNA of SARS-CoV-2 through RNA … landscape and unreported regulatory regions of SARS-CoV-…

[HTML][HTML] The landscape of antibody binding in SARS-CoV-2 infection

AS Heffron, SJ McIlwain, MF Amjadi, DA Baker… - PLoS …, 2021 - journals.plos.org
analysis of antibody binding to the full proteome of SARS-CoV-2, the highest magnitude
binding of anti-SARS-CoV-2 … to SARS-CoV M are similar to those we found in SARS-CoV-2 [35]. …

[HTML][HTML] Mutational landscape and interaction of SARS-CoV-2 with host cellular components

M Srivastava, D Hall, OB Omoru, HM Gill, S Smith… - Microorganisms, 2021 - mdpi.com
… virus during SARS-CoV-2 infection. We also summarize the mutations across the SARS-CoV-…
resources for developing novel therapeutic strategies for combating SARS-CoV-2 infection. …