F Díaz-Viraqué, S Pita, G Greif… - bioRxiv, 2018 - biorxiv.org
… also refines the completeness of coding regions, we first annotated protein-… Nanopore sequencing helps to mitigate the underestimation of both unique and repetitive coding regions …
… the error rate for nanoporesequencing can be compensated … -host variants when subgenomic regions are amplified in … 5% abundance) to neglect any variants below that threshold …
C Baehren, A Pembaur, PP Weil, N Wewers… - International journal of …, 2023 - mdpi.com
… analyses often neglect archaea, but also … sequencing covering variable regions of the gene, and, eg, Euk-563–1132, 574–1132, as well as 616–1132 covered the V4 and V5 regions …
J Chen, J Zhong, X He, I Jakovlić, Y Zhang, H Yang… - bioRxiv, 2022 - biorxiv.org
… The “absence” of these “hidden genes” could be due to the previously neglected complex … evolutionary fate of SVs, we inferred the regions under positive selection for the Chinese and …
R Zhang, P Wang, X Ma, Y Wu, C Luo, L Qiu, B Zeshan… - Viruses, 2021 - mdpi.com
… sequencing, making the identification of transcription-regulatory sequences (TRS) particularly problematic. Here, we applied long-read direct RNA sequencing to … Based on sequencing …
M Wang, A Fu, B Hu, G Shen, R Liu, W Zhao, S Jiang… - MedRxiv, 2020 - medrxiv.org
… sequenced marker genes, such as the V4-5 region of 16s … , often neglected by routine clinical diagnosis, is possible. … of targeted amplification and nanoporesequencing; however, …
… regions to become more similar as the errors are removed (Fig. 2a and Table S4). … that RNA viruses may be a critical but currently neglected component of the global virome [87]. There …
… sequencing that even methylations can be differentiated. Oxford Nanopore uses a different approach utilizing a Nanopore … sequence fragments such as domain duplication regions. …
L Tan, Z Guo, X Wang, DY Kim, R Li - Msystems, 2024 - Am Soc Microbiol
… We also examined the error rates within and outside homopolymer regions (defined as at least … Additionally, we neglected stoichiometry information on individual modification sites here. …